Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
Cux2P70298 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Cux2P70298 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Cux2P70298 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Cux2P70298 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Cux2P70298 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC32.68■■■□□ 2.82
Cux2P70298 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC32.68■■■□□ 2.82
Cux2P70298 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC32.68■■■□□ 2.82
Cux2P70298 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
Cux2P70298 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC32.68■■■□□ 2.82
Cux2P70298 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
Cux2P70298 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
Cux2P70298 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Cux2P70298 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Cux2P70298 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
Cux2P70298 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
Cux2P70298 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
Cux2P70298 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Cux2P70298 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
Cux2P70298 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
Cux2P70298 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
Cux2P70298 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC32.67■■■□□ 2.82
Cux2P70298 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Cux2P70298 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Cux2P70298 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Cux2P70298 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
Cux2P70298 Gm11643-201ENSMUST00000119578 864 ntBASIC32.66■■■□□ 2.82
Cux2P70298 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC32.66■■■□□ 2.82
Cux2P70298 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
Cux2P70298 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Cux2P70298 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Cux2P70298 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC32.64■■■□□ 2.82
Cux2P70298 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC32.64■■■□□ 2.82
Cux2P70298 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Cux2P70298 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Cux2P70298 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC32.64■■■□□ 2.82
Cux2P70298 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC32.64■■■□□ 2.81
Cux2P70298 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Cux2P70298 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC32.63■■■□□ 2.81
Cux2P70298 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC32.63■■■□□ 2.81
Cux2P70298 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Cux2P70298 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Cux2P70298 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
Cux2P70298 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Cux2P70298 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC32.63■■■□□ 2.81
Cux2P70298 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cux2P70298 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cux2P70298 AC131586.2-201ENSMUST00000228370 1512 ntBASIC32.62■■■□□ 2.81
Cux2P70298 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC32.62■■■□□ 2.81
Cux2P70298 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cux2P70298 Gm9484-201ENSMUST00000195892 1159 ntBASIC32.61■■■□□ 2.81
Cux2P70298 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Cux2P70298 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC32.61■■■□□ 2.81
Cux2P70298 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cux2P70298 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cux2P70298 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
Cux2P70298 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Cux2P70298 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
Cux2P70298 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
Cux2P70298 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
Cux2P70298 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Cux2P70298 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC32.6■■■□□ 2.81
Cux2P70298 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Cux2P70298 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC32.59■■■□□ 2.81
Cux2P70298 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
Cux2P70298 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC32.58■■■□□ 2.81
Cux2P70298 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Cux2P70298 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Cux2P70298 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.81
Cux2P70298 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
Cux2P70298 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
Cux2P70298 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
Cux2P70298 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
Cux2P70298 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC32.56■■■□□ 2.8
Cux2P70298 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Cux2P70298 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Cux2P70298 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC32.56■■■□□ 2.8
Cux2P70298 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC32.56■■■□□ 2.8
Cux2P70298 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Cux2P70298 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
Cux2P70298 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
Cux2P70298 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
Cux2P70298 Gm10698-201ENSMUST00000182663 604 ntBASIC32.55■■■□□ 2.8
Cux2P70298 Gm37055-201ENSMUST00000191866 133 ntBASIC32.55■■■□□ 2.8
Cux2P70298 Dio3-201ENSMUST00000097228 1449 ntBASIC32.55■■■□□ 2.8
Cux2P70298 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Cux2P70298 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC32.54■■■□□ 2.8
Cux2P70298 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC32.54■■■□□ 2.8
Cux2P70298 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC32.54■■■□□ 2.8
Cux2P70298 AC153881.1-201ENSMUST00000214448 284 ntBASIC32.54■■■□□ 2.8
Cux2P70298 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Cux2P70298 Gm13509-201ENSMUST00000119733 1308 ntBASIC32.54■■■□□ 2.8
Cux2P70298 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Cux2P70298 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Cux2P70298 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC32.53■■■□□ 2.8
Cux2P70298 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Cux2P70298 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Cux2P70298 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Cux2P70298 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Cux2P70298 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC32.51■■■□□ 2.8
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms