Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.19■□□□□ 0.66
Traf6P70196 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.19■□□□□ 0.66
Traf6P70196 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Traf6P70196 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Traf6P70196 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Traf6P70196 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Traf6P70196 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Traf6P70196 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Traf6P70196 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Traf6P70196 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Traf6P70196 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
Traf6P70196 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Traf6P70196 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.18■□□□□ 0.66
Traf6P70196 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Traf6P70196 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Traf6P70196 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Traf6P70196 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Traf6P70196 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Traf6P70196 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Traf6P70196 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.18■□□□□ 0.66
Traf6P70196 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Traf6P70196 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Traf6P70196 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.17■□□□□ 0.66
Traf6P70196 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Traf6P70196 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Traf6P70196 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Traf6P70196 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Traf6P70196 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Traf6P70196 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.16■□□□□ 0.66
Traf6P70196 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Traf6P70196 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.16■□□□□ 0.66
Traf6P70196 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.16■□□□□ 0.66
Traf6P70196 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Traf6P70196 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Traf6P70196 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Traf6P70196 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Traf6P70196 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Traf6P70196 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Traf6P70196 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Traf6P70196 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Traf6P70196 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.15■□□□□ 0.66
Traf6P70196 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Traf6P70196 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Traf6P70196 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Traf6P70196 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.15■□□□□ 0.66
Traf6P70196 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Traf6P70196 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.15■□□□□ 0.66
Traf6P70196 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Traf6P70196 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Traf6P70196 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Traf6P70196 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Traf6P70196 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.15■□□□□ 0.66
Traf6P70196 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Traf6P70196 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Traf6P70196 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Traf6P70196 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Traf6P70196 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Traf6P70196 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Traf6P70196 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Traf6P70196 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Traf6P70196 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Traf6P70196 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Traf6P70196 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Traf6P70196 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Traf6P70196 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Traf6P70196 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Traf6P70196 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Traf6P70196 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Traf6P70196 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.13■□□□□ 0.65
Traf6P70196 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Traf6P70196 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Traf6P70196 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Traf6P70196 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Traf6P70196 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Traf6P70196 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.13■□□□□ 0.65
Traf6P70196 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Traf6P70196 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Traf6P70196 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Traf6P70196 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Traf6P70196 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Traf6P70196 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Traf6P70196 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Traf6P70196 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Traf6P70196 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.12■□□□□ 0.65
Traf6P70196 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
Traf6P70196 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Traf6P70196 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Traf6P70196 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Traf6P70196 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Traf6P70196 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Traf6P70196 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Traf6P70196 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Traf6P70196 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Traf6P70196 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Traf6P70196 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Traf6P70196 Golph3-205ENSMUST00000228671 2842 ntBASIC19.11■□□□□ 0.65
Traf6P70196 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Traf6P70196 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Traf6P70196 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Traf6P70196 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms