Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx1P63006 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.25■□□□□ 0.67
Lhx1P63006 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx1P63006 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx1P63006 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx1P63006 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx1P63006 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx1P63006 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx1P63006 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx1P63006 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.24■□□□□ 0.67
Lhx1P63006 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Lhx1P63006 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.24■□□□□ 0.67
Lhx1P63006 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx1P63006 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx1P63006 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Lhx1P63006 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx1P63006 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx1P63006 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx1P63006 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Lhx1P63006 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx1P63006 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Lhx1P63006 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Lhx1P63006 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx1P63006 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx1P63006 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx1P63006 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.23■□□□□ 0.67
Lhx1P63006 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx1P63006 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx1P63006 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx1P63006 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Lhx1P63006 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Lhx1P63006 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.22■□□□□ 0.67
Lhx1P63006 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx1P63006 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx1P63006 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.21■□□□□ 0.67
Lhx1P63006 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Lhx1P63006 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx1P63006 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.21■□□□□ 0.67
Lhx1P63006 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.21■□□□□ 0.67
Lhx1P63006 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx1P63006 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx1P63006 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx1P63006 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx1P63006 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx1P63006 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.21■□□□□ 0.67
Lhx1P63006 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.21■□□□□ 0.67
Lhx1P63006 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx1P63006 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx1P63006 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx1P63006 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx1P63006 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx1P63006 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx1P63006 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.2■□□□□ 0.66
Lhx1P63006 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx1P63006 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.2■□□□□ 0.66
Lhx1P63006 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx1P63006 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx1P63006 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx1P63006 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx1P63006 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx1P63006 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx1P63006 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx1P63006 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx1P63006 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx1P63006 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.19■□□□□ 0.66
Lhx1P63006 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx1P63006 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx1P63006 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Lhx1P63006 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx1P63006 Gm42642-201ENSMUST00000200683 355 ntBASIC19.19■□□□□ 0.66
Lhx1P63006 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx1P63006 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx1P63006 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx1P63006 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx1P63006 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx1P63006 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx1P63006 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx1P63006 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx1P63006 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx1P63006 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.18■□□□□ 0.66
Lhx1P63006 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Lhx1P63006 Gm42778-201ENSMUST00000199644 553 ntBASIC19.18■□□□□ 0.66
Lhx1P63006 Gm9988-201ENSMUST00000069786 435 ntBASIC19.18■□□□□ 0.66
Lhx1P63006 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx1P63006 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx1P63006 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Lhx1P63006 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx1P63006 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx1P63006 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx1P63006 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lhx1P63006 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx1P63006 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Lhx1P63006 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx1P63006 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lhx1P63006 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx1P63006 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.16■□□□□ 0.66
Lhx1P63006 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Lhx1P63006 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx1P63006 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx1P63006 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms