Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sem1P60897 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Sem1P60897 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sem1P60897 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Sem1P60897 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
Sem1P60897 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sem1P60897 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sem1P60897 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sem1P60897 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sem1P60897 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sem1P60897 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Sem1P60897 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Sem1P60897 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.58■□□□□ 0.57
Sem1P60897 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sem1P60897 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sem1P60897 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sem1P60897 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sem1P60897 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Sem1P60897 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Sem1P60897 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sem1P60897 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sem1P60897 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sem1P60897 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sem1P60897 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sem1P60897 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sem1P60897 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sem1P60897 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sem1P60897 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sem1P60897 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.57■□□□□ 0.56
Sem1P60897 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sem1P60897 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sem1P60897 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sem1P60897 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Sem1P60897 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sem1P60897 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Sem1P60897 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.57■□□□□ 0.56
Sem1P60897 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.56■□□□□ 0.56
Sem1P60897 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sem1P60897 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sem1P60897 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sem1P60897 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sem1P60897 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sem1P60897 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sem1P60897 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sem1P60897 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sem1P60897 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sem1P60897 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sem1P60897 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sem1P60897 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sem1P60897 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sem1P60897 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sem1P60897 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sem1P60897 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sem1P60897 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sem1P60897 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sem1P60897 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sem1P60897 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sem1P60897 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sem1P60897 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.55■□□□□ 0.56
Sem1P60897 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Sem1P60897 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sem1P60897 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.55■□□□□ 0.56
Sem1P60897 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sem1P60897 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sem1P60897 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sem1P60897 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sem1P60897 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sem1P60897 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sem1P60897 Gm26115-201ENSMUST00000175605 87 ntBASIC18.54■□□□□ 0.56
Sem1P60897 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sem1P60897 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sem1P60897 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sem1P60897 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sem1P60897 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sem1P60897 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.53■□□□□ 0.56
Sem1P60897 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Sem1P60897 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sem1P60897 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sem1P60897 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sem1P60897 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sem1P60897 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sem1P60897 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sem1P60897 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sem1P60897 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sem1P60897 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sem1P60897 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Sem1P60897 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sem1P60897 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sem1P60897 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.52■□□□□ 0.56
Sem1P60897 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Sem1P60897 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Sem1P60897 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sem1P60897 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Sem1P60897 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
Sem1P60897 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sem1P60897 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Sem1P60897 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sem1P60897 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sem1P60897 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sem1P60897 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms