Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx6P54823 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx6P54823 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx6P54823 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx6P54823 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx6P54823 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx6P54823 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx6P54823 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.96■□□□□ 0.79
Ddx6P54823 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.96■□□□□ 0.79
Ddx6P54823 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx6P54823 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ddx6P54823 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ddx6P54823 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.96■□□□□ 0.79
Ddx6P54823 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.95■□□□□ 0.78
Ddx6P54823 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx6P54823 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx6P54823 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx6P54823 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx6P54823 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Ddx6P54823 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx6P54823 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
Ddx6P54823 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ddx6P54823 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ddx6P54823 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx6P54823 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx6P54823 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx6P54823 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx6P54823 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx6P54823 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ddx6P54823 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx6P54823 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx6P54823 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx6P54823 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ddx6P54823 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx6P54823 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx6P54823 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx6P54823 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Ddx6P54823 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx6P54823 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ddx6P54823 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.94■□□□□ 0.78
Ddx6P54823 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx6P54823 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx6P54823 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx6P54823 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx6P54823 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx6P54823 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx6P54823 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ddx6P54823 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx6P54823 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx6P54823 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.93■□□□□ 0.78
Ddx6P54823 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx6P54823 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx6P54823 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.93■□□□□ 0.78
Ddx6P54823 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx6P54823 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx6P54823 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ddx6P54823 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx6P54823 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx6P54823 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ddx6P54823 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.92■□□□□ 0.78
Ddx6P54823 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.92■□□□□ 0.78
Ddx6P54823 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx6P54823 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx6P54823 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ddx6P54823 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx6P54823 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx6P54823 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx6P54823 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.91■□□□□ 0.78
Ddx6P54823 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx6P54823 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx6P54823 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx6P54823 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ddx6P54823 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx6P54823 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx6P54823 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.91■□□□□ 0.78
Ddx6P54823 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx6P54823 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx6P54823 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx6P54823 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ddx6P54823 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.9■□□□□ 0.78
Ddx6P54823 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Ddx6P54823 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx6P54823 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.9■□□□□ 0.78
Ddx6P54823 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx6P54823 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx6P54823 Gm38205-201ENSMUST00000192243 258 ntBASIC19.9■□□□□ 0.78
Ddx6P54823 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.9■□□□□ 0.78
Ddx6P54823 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx6P54823 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ddx6P54823 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx6P54823 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx6P54823 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx6P54823 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx6P54823 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ddx6P54823 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ddx6P54823 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx6P54823 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx6P54823 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ddx6P54823 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.89■□□□□ 0.77
Ddx6P54823 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms