Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Fdft1P53798 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fdft1P53798 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Fdft1P53798 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.46■□□□□ 0.71
Fdft1P53798 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.46■□□□□ 0.71
Fdft1P53798 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Fdft1P53798 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fdft1P53798 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Fdft1P53798 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fdft1P53798 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Fdft1P53798 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fdft1P53798 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Fdft1P53798 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fdft1P53798 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fdft1P53798 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Fdft1P53798 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fdft1P53798 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fdft1P53798 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fdft1P53798 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fdft1P53798 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fdft1P53798 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fdft1P53798 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fdft1P53798 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fdft1P53798 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Fdft1P53798 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fdft1P53798 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fdft1P53798 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Fdft1P53798 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fdft1P53798 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fdft1P53798 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.44■□□□□ 0.7
Fdft1P53798 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fdft1P53798 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Fdft1P53798 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fdft1P53798 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fdft1P53798 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Fdft1P53798 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.43■□□□□ 0.7
Fdft1P53798 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fdft1P53798 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.43■□□□□ 0.7
Fdft1P53798 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fdft1P53798 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Fdft1P53798 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.43■□□□□ 0.7
Fdft1P53798 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Fdft1P53798 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Fdft1P53798 Gm9847-201ENSMUST00000052528 599 ntBASIC19.42■□□□□ 0.7
Fdft1P53798 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Fdft1P53798 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fdft1P53798 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fdft1P53798 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fdft1P53798 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fdft1P53798 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.41■□□□□ 0.7
Fdft1P53798 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fdft1P53798 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.41■□□□□ 0.7
Fdft1P53798 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.41■□□□□ 0.7
Fdft1P53798 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fdft1P53798 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Fdft1P53798 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fdft1P53798 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fdft1P53798 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Fdft1P53798 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.4■□□□□ 0.7
Fdft1P53798 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fdft1P53798 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fdft1P53798 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fdft1P53798 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Fdft1P53798 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.39■□□□□ 0.7
Fdft1P53798 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.39■□□□□ 0.69
Fdft1P53798 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Fdft1P53798 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Fdft1P53798 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fdft1P53798 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fdft1P53798 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fdft1P53798 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Fdft1P53798 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fdft1P53798 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Fdft1P53798 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Fdft1P53798 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.38■□□□□ 0.69
Fdft1P53798 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.38■□□□□ 0.69
Fdft1P53798 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Fdft1P53798 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.38■□□□□ 0.69
Fdft1P53798 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fdft1P53798 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fdft1P53798 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fdft1P53798 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Fdft1P53798 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Fdft1P53798 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fdft1P53798 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Fdft1P53798 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.37■□□□□ 0.69
Fdft1P53798 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fdft1P53798 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.37■□□□□ 0.69
Fdft1P53798 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Fdft1P53798 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Fdft1P53798 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Fdft1P53798 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Fdft1P53798 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fdft1P53798 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fdft1P53798 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fdft1P53798 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Fdft1P53798 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.36■□□□□ 0.69
Fdft1P53798 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fdft1P53798 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fdft1P53798 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms