Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lhx4P53776 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lhx4P53776 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Lhx4P53776 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lhx4P53776 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lhx4P53776 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.46■□□□□ 0.23
Lhx4P53776 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lhx4P53776 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Lhx4P53776 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lhx4P53776 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Lhx4P53776 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.45■□□□□ 0.22
Lhx4P53776 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lhx4P53776 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Lhx4P53776 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.45■□□□□ 0.22
Lhx4P53776 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lhx4P53776 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lhx4P53776 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lhx4P53776 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lhx4P53776 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lhx4P53776 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lhx4P53776 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lhx4P53776 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lhx4P53776 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lhx4P53776 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lhx4P53776 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lhx4P53776 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lhx4P53776 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lhx4P53776 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lhx4P53776 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lhx4P53776 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lhx4P53776 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lhx4P53776 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Lhx4P53776 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Lhx4P53776 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lhx4P53776 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lhx4P53776 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.44■□□□□ 0.22
Lhx4P53776 Mir6236-201ENSMUST00000184437 123 ntBASIC16.44■□□□□ 0.22
Lhx4P53776 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lhx4P53776 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Lhx4P53776 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Lhx4P53776 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Lhx4P53776 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lhx4P53776 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lhx4P53776 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lhx4P53776 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lhx4P53776 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lhx4P53776 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lhx4P53776 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lhx4P53776 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lhx4P53776 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Lhx4P53776 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lhx4P53776 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lhx4P53776 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lhx4P53776 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lhx4P53776 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.43■□□□□ 0.22
Lhx4P53776 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lhx4P53776 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lhx4P53776 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Lhx4P53776 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.42■□□□□ 0.22
Lhx4P53776 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lhx4P53776 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lhx4P53776 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lhx4P53776 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lhx4P53776 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lhx4P53776 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.42■□□□□ 0.22
Lhx4P53776 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.42■□□□□ 0.22
Lhx4P53776 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.42■□□□□ 0.22
Lhx4P53776 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Lhx4P53776 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.42■□□□□ 0.22
Lhx4P53776 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lhx4P53776 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lhx4P53776 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lhx4P53776 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lhx4P53776 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx4P53776 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx4P53776 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx4P53776 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx4P53776 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Lhx4P53776 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx4P53776 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lhx4P53776 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.41■□□□□ 0.22
Lhx4P53776 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx4P53776 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx4P53776 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Lhx4P53776 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Lhx4P53776 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lhx4P53776 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx4P53776 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lhx4P53776 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx4P53776 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.4■□□□□ 0.22
Lhx4P53776 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx4P53776 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.4■□□□□ 0.22
Lhx4P53776 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx4P53776 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Lhx4P53776 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.4■□□□□ 0.22
Lhx4P53776 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx4P53776 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Lhx4P53776 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lhx4P53776 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.39■□□□□ 0.22
Lhx4P53776 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms