Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdx1P52946 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pdx1P52946 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.38■□□□□ 0.69
Pdx1P52946 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Pdx1P52946 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdx1P52946 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdx1P52946 AA386476-201ENSMUST00000098781 1665 ntBASIC19.37■□□□□ 0.69
Pdx1P52946 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.37■□□□□ 0.69
Pdx1P52946 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.37■□□□□ 0.69
Pdx1P52946 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.37■□□□□ 0.69
Pdx1P52946 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.37■□□□□ 0.69
Pdx1P52946 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdx1P52946 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdx1P52946 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pdx1P52946 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdx1P52946 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdx1P52946 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdx1P52946 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdx1P52946 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pdx1P52946 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdx1P52946 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pdx1P52946 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdx1P52946 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pdx1P52946 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Pdx1P52946 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pdx1P52946 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.35■□□□□ 0.69
Pdx1P52946 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pdx1P52946 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pdx1P52946 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdx1P52946 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdx1P52946 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Pdx1P52946 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pdx1P52946 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.34■□□□□ 0.69
Pdx1P52946 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdx1P52946 Gm15039-201ENSMUST00000118914 875 ntBASIC19.34■□□□□ 0.69
Pdx1P52946 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
Pdx1P52946 Gm43017-201ENSMUST00000198296 752 ntBASIC19.34■□□□□ 0.69
Pdx1P52946 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pdx1P52946 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdx1P52946 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdx1P52946 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdx1P52946 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdx1P52946 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pdx1P52946 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pdx1P52946 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.33■□□□□ 0.69
Pdx1P52946 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Pdx1P52946 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdx1P52946 Serp2-204ENSMUST00000228055 705 ntBASIC19.33■□□□□ 0.68
Pdx1P52946 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Pdx1P52946 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdx1P52946 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdx1P52946 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdx1P52946 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdx1P52946 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pdx1P52946 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdx1P52946 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pdx1P52946 Smad6-203ENSMUST00000179458 273 ntBASIC19.32■□□□□ 0.68
Pdx1P52946 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pdx1P52946 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.32■□□□□ 0.68
Pdx1P52946 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.32■□□□□ 0.68
Pdx1P52946 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdx1P52946 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.32■□□□□ 0.68
Pdx1P52946 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdx1P52946 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdx1P52946 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdx1P52946 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pdx1P52946 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdx1P52946 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdx1P52946 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdx1P52946 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pdx1P52946 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdx1P52946 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdx1P52946 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.31■□□□□ 0.68
Pdx1P52946 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.31■□□□□ 0.68
Pdx1P52946 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdx1P52946 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdx1P52946 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pdx1P52946 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdx1P52946 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdx1P52946 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Pdx1P52946 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdx1P52946 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Pdx1P52946 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdx1P52946 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pdx1P52946 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdx1P52946 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pdx1P52946 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdx1P52946 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdx1P52946 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdx1P52946 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdx1P52946 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdx1P52946 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pdx1P52946 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pdx1P52946 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.29■□□□□ 0.68
Pdx1P52946 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.29■□□□□ 0.68
Pdx1P52946 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdx1P52946 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.29■□□□□ 0.68
Pdx1P52946 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pdx1P52946 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pdx1P52946 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms