Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClgnP52194 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClgnP52194 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ClgnP52194 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
ClgnP52194 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.76■□□□□ 0.75
ClgnP52194 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClgnP52194 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ClgnP52194 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.75■□□□□ 0.75
ClgnP52194 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClgnP52194 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClgnP52194 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClgnP52194 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.75■□□□□ 0.75
ClgnP52194 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClgnP52194 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClgnP52194 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ClgnP52194 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClgnP52194 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClgnP52194 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.75■□□□□ 0.75
ClgnP52194 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ClgnP52194 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClgnP52194 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.74■□□□□ 0.75
ClgnP52194 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ClgnP52194 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClgnP52194 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClgnP52194 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
ClgnP52194 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ClgnP52194 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
ClgnP52194 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClgnP52194 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClgnP52194 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ClgnP52194 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClgnP52194 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClgnP52194 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.73■□□□□ 0.75
ClgnP52194 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClgnP52194 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.73■□□□□ 0.75
ClgnP52194 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClgnP52194 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClgnP52194 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClgnP52194 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClgnP52194 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.72■□□□□ 0.75
ClgnP52194 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.72■□□□□ 0.75
ClgnP52194 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClgnP52194 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClgnP52194 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ClgnP52194 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClgnP52194 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
ClgnP52194 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClgnP52194 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ClgnP52194 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.71■□□□□ 0.75
ClgnP52194 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClgnP52194 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClgnP52194 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClgnP52194 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.71■□□□□ 0.75
ClgnP52194 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ClgnP52194 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.71■□□□□ 0.75
ClgnP52194 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ClgnP52194 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClgnP52194 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClgnP52194 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ClgnP52194 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ClgnP52194 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.7■□□□□ 0.74
ClgnP52194 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClgnP52194 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.7■□□□□ 0.74
ClgnP52194 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ClgnP52194 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ClgnP52194 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClgnP52194 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClgnP52194 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClgnP52194 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.7■□□□□ 0.74
ClgnP52194 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ClgnP52194 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ClgnP52194 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClgnP52194 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ClgnP52194 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClgnP52194 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClgnP52194 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ClgnP52194 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClgnP52194 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.69■□□□□ 0.74
ClgnP52194 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
ClgnP52194 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ClgnP52194 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ClgnP52194 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClgnP52194 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClgnP52194 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.68■□□□□ 0.74
ClgnP52194 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClgnP52194 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClgnP52194 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClgnP52194 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.67■□□□□ 0.74
ClgnP52194 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ClgnP52194 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClgnP52194 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.67■□□□□ 0.74
ClgnP52194 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.67■□□□□ 0.74
ClgnP52194 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.67■□□□□ 0.74
ClgnP52194 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClgnP52194 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClgnP52194 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.67■□□□□ 0.74
ClgnP52194 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ClgnP52194 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ClgnP52194 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ClgnP52194 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms