Protein–RNA interactions for Protein: P46737

Brcc3, Lys-63-specific deubiquitinase BRCC36, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brcc3P46737 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Brcc3P46737 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Brcc3P46737 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brcc3P46737 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brcc3P46737 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.65■□□□□ 0.9
Brcc3P46737 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.65■□□□□ 0.9
Brcc3P46737 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brcc3P46737 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brcc3P46737 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Brcc3P46737 AA386476-201ENSMUST00000098781 1665 ntBASIC20.64■□□□□ 0.9
Brcc3P46737 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Brcc3P46737 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Brcc3P46737 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Brcc3P46737 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Brcc3P46737 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brcc3P46737 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Brcc3P46737 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brcc3P46737 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Brcc3P46737 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Brcc3P46737 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Brcc3P46737 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Brcc3P46737 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Brcc3P46737 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Brcc3P46737 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Brcc3P46737 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Brcc3P46737 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Brcc3P46737 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Brcc3P46737 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brcc3P46737 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.62■□□□□ 0.89
Brcc3P46737 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.62■□□□□ 0.89
Brcc3P46737 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brcc3P46737 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Brcc3P46737 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Brcc3P46737 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Brcc3P46737 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Brcc3P46737 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Brcc3P46737 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Brcc3P46737 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.61■□□□□ 0.89
Brcc3P46737 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Brcc3P46737 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Brcc3P46737 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Brcc3P46737 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brcc3P46737 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brcc3P46737 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brcc3P46737 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brcc3P46737 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.6■□□□□ 0.89
Brcc3P46737 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Brcc3P46737 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Brcc3P46737 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brcc3P46737 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Brcc3P46737 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brcc3P46737 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Brcc3P46737 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Brcc3P46737 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.59■□□□□ 0.89
Brcc3P46737 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.59■□□□□ 0.89
Brcc3P46737 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brcc3P46737 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Brcc3P46737 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brcc3P46737 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brcc3P46737 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.59■□□□□ 0.89
Brcc3P46737 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brcc3P46737 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Brcc3P46737 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.59■□□□□ 0.89
Brcc3P46737 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Brcc3P46737 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.59■□□□□ 0.89
Brcc3P46737 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.59■□□□□ 0.89
Brcc3P46737 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brcc3P46737 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brcc3P46737 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Brcc3P46737 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brcc3P46737 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brcc3P46737 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Brcc3P46737 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Brcc3P46737 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Brcc3P46737 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Brcc3P46737 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Brcc3P46737 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Brcc3P46737 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Brcc3P46737 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Brcc3P46737 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Brcc3P46737 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Brcc3P46737 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Brcc3P46737 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Brcc3P46737 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brcc3P46737 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Brcc3P46737 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brcc3P46737 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Brcc3P46737 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Brcc3P46737 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Brcc3P46737 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Brcc3P46737 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Brcc3P46737 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Brcc3P46737 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Brcc3P46737 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Brcc3P46737 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
Brcc3P46737 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Brcc3P46737 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Brcc3P46737 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.56■□□□□ 0.88
Brcc3P46737 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.56■□□□□ 0.88
Brcc3P46737 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms