Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gdf6P43028 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gdf6P43028 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Gdf6P43028 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gdf6P43028 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.65■□□□□ 0.9
Gdf6P43028 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gdf6P43028 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.65■□□□□ 0.9
Gdf6P43028 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gdf6P43028 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.64■□□□□ 0.9
Gdf6P43028 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Gdf6P43028 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.64■□□□□ 0.89
Gdf6P43028 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gdf6P43028 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Gdf6P43028 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.64■□□□□ 0.89
Gdf6P43028 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gdf6P43028 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gdf6P43028 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gdf6P43028 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gdf6P43028 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gdf6P43028 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gdf6P43028 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gdf6P43028 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gdf6P43028 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
Gdf6P43028 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gdf6P43028 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.63■□□□□ 0.89
Gdf6P43028 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Gdf6P43028 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gdf6P43028 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gdf6P43028 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gdf6P43028 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gdf6P43028 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gdf6P43028 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Gdf6P43028 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gdf6P43028 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gdf6P43028 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gdf6P43028 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.62■□□□□ 0.89
Gdf6P43028 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.62■□□□□ 0.89
Gdf6P43028 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.62■□□□□ 0.89
Gdf6P43028 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gdf6P43028 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gdf6P43028 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gdf6P43028 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gdf6P43028 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.62■□□□□ 0.89
Gdf6P43028 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gdf6P43028 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.61■□□□□ 0.89
Gdf6P43028 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gdf6P43028 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gdf6P43028 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Gdf6P43028 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gdf6P43028 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.61■□□□□ 0.89
Gdf6P43028 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gdf6P43028 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gdf6P43028 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gdf6P43028 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gdf6P43028 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Gdf6P43028 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gdf6P43028 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gdf6P43028 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gdf6P43028 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.6■□□□□ 0.89
Gdf6P43028 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gdf6P43028 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gdf6P43028 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gdf6P43028 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gdf6P43028 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gdf6P43028 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gdf6P43028 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gdf6P43028 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gdf6P43028 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gdf6P43028 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gdf6P43028 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gdf6P43028 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gdf6P43028 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.59■□□□□ 0.89
Gdf6P43028 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Gdf6P43028 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.59■□□□□ 0.89
Gdf6P43028 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.59■□□□□ 0.89
Gdf6P43028 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gdf6P43028 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gdf6P43028 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Gdf6P43028 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.58■□□□□ 0.89
Gdf6P43028 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gdf6P43028 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gdf6P43028 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gdf6P43028 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gdf6P43028 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gdf6P43028 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.57■□□□□ 0.88
Gdf6P43028 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gdf6P43028 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gdf6P43028 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gdf6P43028 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gdf6P43028 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gdf6P43028 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gdf6P43028 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.57■□□□□ 0.88
Gdf6P43028 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gdf6P43028 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gdf6P43028 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gdf6P43028 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gdf6P43028 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Gdf6P43028 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gdf6P43028 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.56■□□□□ 0.88
Gdf6P43028 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms