Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.99■□□□□ 0.47
Nkx2-2P42586 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-2P42586 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-2P42586 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-2P42586 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-2P42586 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-2P42586 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.99■□□□□ 0.47
Nkx2-2P42586 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-2P42586 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-2P42586 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-2P42586 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Nkx2-2P42586 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-2P42586 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-2P42586 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-2P42586 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-2P42586 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Nkx2-2P42586 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-2P42586 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-2P42586 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-2P42586 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-2P42586 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-2P42586 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-2P42586 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-2P42586 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-2P42586 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-2P42586 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-2P42586 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-2P42586 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-2P42586 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.97■□□□□ 0.47
Nkx2-2P42586 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-2P42586 Gm45417-201ENSMUST00000209533 758 ntBASIC17.97■□□□□ 0.47
Nkx2-2P42586 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-2P42586 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-2P42586 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-2P42586 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-2P42586 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Nkx2-2P42586 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.96■□□□□ 0.47
Nkx2-2P42586 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-2P42586 Gm8493-201ENSMUST00000196881 489 ntBASIC17.96■□□□□ 0.47
Nkx2-2P42586 Gm43173-201ENSMUST00000202246 593 ntBASIC17.96■□□□□ 0.47
Nkx2-2P42586 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.96■□□□□ 0.47
Nkx2-2P42586 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-2P42586 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-2P42586 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-2P42586 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-2P42586 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.96■□□□□ 0.47
Nkx2-2P42586 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.96■□□□□ 0.47
Nkx2-2P42586 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nkx2-2P42586 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.96■□□□□ 0.46
Nkx2-2P42586 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-2P42586 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-2P42586 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-2P42586 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-2P42586 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-2P42586 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.95■□□□□ 0.46
Nkx2-2P42586 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Nkx2-2P42586 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-2P42586 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-2P42586 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-2P42586 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-2P42586 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-2P42586 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.94■□□□□ 0.46
Nkx2-2P42586 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.94■□□□□ 0.46
Nkx2-2P42586 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-2P42586 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.94■□□□□ 0.46
Nkx2-2P42586 Gm6139-201ENSMUST00000079261 882 ntBASIC17.94■□□□□ 0.46
Nkx2-2P42586 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-2P42586 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-2P42586 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.94■□□□□ 0.46
Nkx2-2P42586 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-2P42586 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-2P42586 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nkx2-2P42586 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-2P42586 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-2P42586 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.93■□□□□ 0.46
Nkx2-2P42586 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-2P42586 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-2P42586 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-2P42586 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-2P42586 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-2P42586 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-2P42586 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nkx2-2P42586 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-2P42586 Smad6-203ENSMUST00000179458 273 ntBASIC17.92■□□□□ 0.46
Nkx2-2P42586 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-2P42586 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-2P42586 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nkx2-2P42586 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-2P42586 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-2P42586 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-2P42586 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-2P42586 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.91■□□□□ 0.46
Nkx2-2P42586 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-2P42586 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Nkx2-2P42586 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-2P42586 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-2P42586 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.9■□□□□ 0.46
Nkx2-2P42586 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-2P42586 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-2P42586 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms