Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcl12P40224 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcl12P40224 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcl12P40224 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcl12P40224 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcl12P40224 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcl12P40224 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Cxcl12P40224 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.32■□□□□ 0.84
Cxcl12P40224 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcl12P40224 Gm26524-201ENSMUST00000192339 390 ntBASIC20.32■□□□□ 0.84
Cxcl12P40224 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcl12P40224 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcl12P40224 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.31■□□□□ 0.84
Cxcl12P40224 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cxcl12P40224 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cxcl12P40224 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cxcl12P40224 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.31■□□□□ 0.84
Cxcl12P40224 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Cxcl12P40224 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.31■□□□□ 0.84
Cxcl12P40224 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Cxcl12P40224 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cxcl12P40224 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cxcl12P40224 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cxcl12P40224 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcl12P40224 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.3■□□□□ 0.84
Cxcl12P40224 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcl12P40224 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Cxcl12P40224 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcl12P40224 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcl12P40224 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcl12P40224 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcl12P40224 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcl12P40224 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcl12P40224 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcl12P40224 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcl12P40224 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcl12P40224 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cxcl12P40224 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cxcl12P40224 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.29■□□□□ 0.84
Cxcl12P40224 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cxcl12P40224 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cxcl12P40224 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cxcl12P40224 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cxcl12P40224 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cxcl12P40224 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cxcl12P40224 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.28■□□□□ 0.84
Cxcl12P40224 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cxcl12P40224 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cxcl12P40224 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cxcl12P40224 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cxcl12P40224 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cxcl12P40224 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.27■□□□□ 0.84
Cxcl12P40224 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cxcl12P40224 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cxcl12P40224 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cxcl12P40224 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cxcl12P40224 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cxcl12P40224 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cxcl12P40224 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Cxcl12P40224 Gm27275-201ENSMUST00000184318 272 ntBASIC20.27■□□□□ 0.84
Cxcl12P40224 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.27■□□□□ 0.84
Cxcl12P40224 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.27■□□□□ 0.84
Cxcl12P40224 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Cxcl12P40224 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cxcl12P40224 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.27■□□□□ 0.84
Cxcl12P40224 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Cxcl12P40224 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cxcl12P40224 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cxcl12P40224 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cxcl12P40224 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cxcl12P40224 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cxcl12P40224 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cxcl12P40224 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.26■□□□□ 0.83
Cxcl12P40224 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cxcl12P40224 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cxcl12P40224 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cxcl12P40224 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.26■□□□□ 0.83
Cxcl12P40224 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cxcl12P40224 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cxcl12P40224 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cxcl12P40224 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cxcl12P40224 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cxcl12P40224 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cxcl12P40224 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cxcl12P40224 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cxcl12P40224 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cxcl12P40224 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cxcl12P40224 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.25■□□□□ 0.83
Cxcl12P40224 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Cxcl12P40224 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cxcl12P40224 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Cxcl12P40224 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.24■□□□□ 0.83
Cxcl12P40224 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.24■□□□□ 0.83
Cxcl12P40224 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.24■□□□□ 0.83
Cxcl12P40224 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cxcl12P40224 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cxcl12P40224 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cxcl12P40224 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Cxcl12P40224 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
Cxcl12P40224 Gm5643-201ENSMUST00000117081 966 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms