Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HmgclP38060 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HmgclP38060 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HmgclP38060 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.31■□□□□ 0.68
HmgclP38060 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HmgclP38060 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HmgclP38060 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HmgclP38060 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HmgclP38060 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.31■□□□□ 0.68
HmgclP38060 Gm45417-201ENSMUST00000209533 758 ntBASIC19.31■□□□□ 0.68
HmgclP38060 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HmgclP38060 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HmgclP38060 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HmgclP38060 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HmgclP38060 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HmgclP38060 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HmgclP38060 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HmgclP38060 Gm8493-201ENSMUST00000196881 489 ntBASIC19.3■□□□□ 0.68
HmgclP38060 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HmgclP38060 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HmgclP38060 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HmgclP38060 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HmgclP38060 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HmgclP38060 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HmgclP38060 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HmgclP38060 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
HmgclP38060 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HmgclP38060 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HmgclP38060 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.29■□□□□ 0.68
HmgclP38060 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HmgclP38060 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HmgclP38060 Gm43173-201ENSMUST00000202246 593 ntBASIC19.29■□□□□ 0.68
HmgclP38060 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HmgclP38060 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HmgclP38060 Gm6139-201ENSMUST00000079261 882 ntBASIC19.29■□□□□ 0.68
HmgclP38060 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HmgclP38060 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HmgclP38060 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HmgclP38060 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.28■□□□□ 0.68
HmgclP38060 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.28■□□□□ 0.68
HmgclP38060 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HmgclP38060 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HmgclP38060 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.28■□□□□ 0.68
HmgclP38060 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HmgclP38060 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HmgclP38060 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HmgclP38060 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.27■□□□□ 0.68
HmgclP38060 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HmgclP38060 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HmgclP38060 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HmgclP38060 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HmgclP38060 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.27■□□□□ 0.68
HmgclP38060 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HmgclP38060 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HmgclP38060 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.27■□□□□ 0.68
HmgclP38060 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
HmgclP38060 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HmgclP38060 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HmgclP38060 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HmgclP38060 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HmgclP38060 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HmgclP38060 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HmgclP38060 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HmgclP38060 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.26■□□□□ 0.67
HmgclP38060 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HmgclP38060 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.25■□□□□ 0.67
HmgclP38060 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HmgclP38060 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HmgclP38060 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HmgclP38060 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HmgclP38060 Smad6-203ENSMUST00000179458 273 ntBASIC19.25■□□□□ 0.67
HmgclP38060 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HmgclP38060 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HmgclP38060 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HmgclP38060 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HmgclP38060 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HmgclP38060 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HmgclP38060 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
HmgclP38060 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.24■□□□□ 0.67
HmgclP38060 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.24■□□□□ 0.67
HmgclP38060 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HmgclP38060 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HmgclP38060 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
HmgclP38060 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.23■□□□□ 0.67
HmgclP38060 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HmgclP38060 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HmgclP38060 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.23■□□□□ 0.67
HmgclP38060 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HmgclP38060 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.23■□□□□ 0.67
HmgclP38060 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HmgclP38060 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HmgclP38060 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HmgclP38060 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HmgclP38060 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HmgclP38060 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HmgclP38060 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HmgclP38060 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HmgclP38060 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.22■□□□□ 0.67
HmgclP38060 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HmgclP38060 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms