Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.11■□□□□ 0.49
Foxa1P35582 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Foxa1P35582 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Foxa1P35582 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa1P35582 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.09■□□□□ 0.49
Foxa1P35582 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Foxa1P35582 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxa1P35582 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.08■□□□□ 0.49
Foxa1P35582 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxa1P35582 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
Foxa1P35582 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.08■□□□□ 0.49
Foxa1P35582 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxa1P35582 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxa1P35582 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxa1P35582 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Foxa1P35582 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxa1P35582 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Foxa1P35582 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
Foxa1P35582 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Foxa1P35582 Gm43017-201ENSMUST00000198296 752 ntBASIC18.08■□□□□ 0.48
Foxa1P35582 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxa1P35582 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxa1P35582 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxa1P35582 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxa1P35582 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
Foxa1P35582 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxa1P35582 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Foxa1P35582 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Foxa1P35582 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.07■□□□□ 0.48
Foxa1P35582 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Foxa1P35582 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Foxa1P35582 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxa1P35582 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxa1P35582 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa1P35582 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa1P35582 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa1P35582 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.06■□□□□ 0.48
Foxa1P35582 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Foxa1P35582 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa1P35582 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa1P35582 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa1P35582 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.06■□□□□ 0.48
Foxa1P35582 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa1P35582 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.06■□□□□ 0.48
Foxa1P35582 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.06■□□□□ 0.48
Foxa1P35582 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.06■□□□□ 0.48
Foxa1P35582 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa1P35582 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa1P35582 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa1P35582 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa1P35582 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxa1P35582 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxa1P35582 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxa1P35582 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Foxa1P35582 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Foxa1P35582 Smad6-203ENSMUST00000179458 273 ntBASIC18.05■□□□□ 0.48
Foxa1P35582 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxa1P35582 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Foxa1P35582 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxa1P35582 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxa1P35582 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa1P35582 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Foxa1P35582 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa1P35582 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa1P35582 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa1P35582 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa1P35582 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa1P35582 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Foxa1P35582 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.04■□□□□ 0.48
Foxa1P35582 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.04■□□□□ 0.48
Foxa1P35582 Serp2-204ENSMUST00000228055 705 ntBASIC18.04■□□□□ 0.48
Foxa1P35582 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa1P35582 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa1P35582 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxa1P35582 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Foxa1P35582 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Foxa1P35582 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Foxa1P35582 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Foxa1P35582 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Foxa1P35582 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Foxa1P35582 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Foxa1P35582 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Foxa1P35582 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Foxa1P35582 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Foxa1P35582 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Foxa1P35582 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms