Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thbs1P35441 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Thbs1P35441 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Thbs1P35441 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.05■□□□□ 0.48
Thbs1P35441 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.05■□□□□ 0.48
Thbs1P35441 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thbs1P35441 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Thbs1P35441 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thbs1P35441 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thbs1P35441 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.05■□□□□ 0.48
Thbs1P35441 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Thbs1P35441 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Thbs1P35441 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thbs1P35441 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thbs1P35441 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thbs1P35441 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thbs1P35441 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Thbs1P35441 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.04■□□□□ 0.48
Thbs1P35441 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.04■□□□□ 0.48
Thbs1P35441 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thbs1P35441 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thbs1P35441 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thbs1P35441 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.03■□□□□ 0.48
Thbs1P35441 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thbs1P35441 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thbs1P35441 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thbs1P35441 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Thbs1P35441 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thbs1P35441 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Thbs1P35441 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Thbs1P35441 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.02■□□□□ 0.48
Thbs1P35441 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thbs1P35441 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Thbs1P35441 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Thbs1P35441 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thbs1P35441 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thbs1P35441 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thbs1P35441 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Thbs1P35441 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Thbs1P35441 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thbs1P35441 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Thbs1P35441 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thbs1P35441 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thbs1P35441 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Thbs1P35441 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thbs1P35441 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thbs1P35441 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Thbs1P35441 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Thbs1P35441 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Thbs1P35441 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thbs1P35441 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thbs1P35441 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Thbs1P35441 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Thbs1P35441 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thbs1P35441 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thbs1P35441 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thbs1P35441 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thbs1P35441 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18■□□□□ 0.47
Thbs1P35441 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18■□□□□ 0.47
Thbs1P35441 AC154266.1-201ENSMUST00000223190 503 ntBASIC18■□□□□ 0.47
Thbs1P35441 Gm20100-201ENSMUST00000209418 2272 ntBASIC18■□□□□ 0.47
Thbs1P35441 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Thbs1P35441 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Thbs1P35441 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thbs1P35441 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thbs1P35441 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Thbs1P35441 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Thbs1P35441 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Thbs1P35441 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.99■□□□□ 0.47
Thbs1P35441 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.99■□□□□ 0.47
Thbs1P35441 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.99■□□□□ 0.47
Thbs1P35441 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Thbs1P35441 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thbs1P35441 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Thbs1P35441 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thbs1P35441 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thbs1P35441 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Thbs1P35441 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thbs1P35441 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thbs1P35441 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thbs1P35441 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thbs1P35441 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Thbs1P35441 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thbs1P35441 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thbs1P35441 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thbs1P35441 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Thbs1P35441 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thbs1P35441 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.97■□□□□ 0.47
Thbs1P35441 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thbs1P35441 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thbs1P35441 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thbs1P35441 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thbs1P35441 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thbs1P35441 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Thbs1P35441 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Thbs1P35441 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.96■□□□□ 0.47
Thbs1P35441 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Thbs1P35441 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thbs1P35441 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thbs1P35441 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms