Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.87■□□□□ 0.61
Hoxc11P31313 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc11P31313 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Hoxc11P31313 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc11P31313 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc11P31313 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc11P31313 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc11P31313 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc11P31313 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc11P31313 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc11P31313 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.86■□□□□ 0.61
Hoxc11P31313 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.86■□□□□ 0.61
Hoxc11P31313 Gm10849-201ENSMUST00000100397 618 ntBASIC18.86■□□□□ 0.61
Hoxc11P31313 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.86■□□□□ 0.61
Hoxc11P31313 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc11P31313 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc11P31313 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc11P31313 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc11P31313 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc11P31313 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc11P31313 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.85■□□□□ 0.61
Hoxc11P31313 Gm7291-201ENSMUST00000199147 382 ntBASIC18.85■□□□□ 0.61
Hoxc11P31313 Gm42642-201ENSMUST00000200683 355 ntBASIC18.85■□□□□ 0.61
Hoxc11P31313 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.85■□□□□ 0.61
Hoxc11P31313 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc11P31313 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc11P31313 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc11P31313 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc11P31313 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Hoxc11P31313 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc11P31313 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc11P31313 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc11P31313 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc11P31313 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Hoxc11P31313 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc11P31313 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc11P31313 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.84■□□□□ 0.61
Hoxc11P31313 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc11P31313 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc11P31313 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc11P31313 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Hoxc11P31313 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc11P31313 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc11P31313 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc11P31313 Gm26571-201ENSMUST00000181399 666 ntBASIC18.83■□□□□ 0.6
Hoxc11P31313 Gm27405-201ENSMUST00000184201 112 ntBASIC18.83■□□□□ 0.6
Hoxc11P31313 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.83■□□□□ 0.6
Hoxc11P31313 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc11P31313 Gm42569-201ENSMUST00000200539 472 ntBASIC18.83■□□□□ 0.6
Hoxc11P31313 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Hoxc11P31313 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc11P31313 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc11P31313 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc11P31313 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc11P31313 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc11P31313 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc11P31313 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.81■□□□□ 0.6
Hoxc11P31313 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
Hoxc11P31313 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Hoxc11P31313 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc11P31313 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc11P31313 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc11P31313 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Hoxc11P31313 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc11P31313 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.8■□□□□ 0.6
Hoxc11P31313 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Hoxc11P31313 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc11P31313 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc11P31313 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc11P31313 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.8■□□□□ 0.6
Hoxc11P31313 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc11P31313 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc11P31313 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.8■□□□□ 0.6
Hoxc11P31313 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc11P31313 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc11P31313 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc11P31313 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc11P31313 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Hoxc11P31313 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.79■□□□□ 0.6
Hoxc11P31313 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc11P31313 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Hoxc11P31313 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hoxc11P31313 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc11P31313 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc11P31313 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc11P31313 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc11P31313 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc11P31313 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc11P31313 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc11P31313 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc11P31313 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc11P31313 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.78■□□□□ 0.6
Hoxc11P31313 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc11P31313 Gm18671-201ENSMUST00000214826 683 ntBASIC18.78■□□□□ 0.6
Hoxc11P31313 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.78■□□□□ 0.6
Hoxc11P31313 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc11P31313 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.78■□□□□ 0.6
Hoxc11P31313 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc11P31313 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc11P31313 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms