Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RxrbP28704 Grk6-206ENSMUST00000224995 2971 ntBASIC19.68■□□□□ 0.74
RxrbP28704 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RxrbP28704 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RxrbP28704 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.67■□□□□ 0.74
RxrbP28704 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RxrbP28704 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.67■□□□□ 0.74
RxrbP28704 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.67■□□□□ 0.74
RxrbP28704 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.67■□□□□ 0.74
RxrbP28704 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
RxrbP28704 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
RxrbP28704 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RxrbP28704 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RxrbP28704 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.67■□□□□ 0.74
RxrbP28704 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RxrbP28704 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RxrbP28704 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RxrbP28704 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RxrbP28704 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RxrbP28704 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
RxrbP28704 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RxrbP28704 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RxrbP28704 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RxrbP28704 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.66■□□□□ 0.74
RxrbP28704 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RxrbP28704 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.66■□□□□ 0.74
RxrbP28704 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RxrbP28704 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RxrbP28704 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RxrbP28704 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RxrbP28704 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RxrbP28704 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RxrbP28704 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RxrbP28704 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RxrbP28704 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RxrbP28704 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RxrbP28704 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.65■□□□□ 0.74
RxrbP28704 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.65■□□□□ 0.74
RxrbP28704 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RxrbP28704 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RxrbP28704 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RxrbP28704 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RxrbP28704 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RxrbP28704 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RxrbP28704 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.64■□□□□ 0.73
RxrbP28704 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
RxrbP28704 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RxrbP28704 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.64■□□□□ 0.73
RxrbP28704 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RxrbP28704 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RxrbP28704 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RxrbP28704 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.64■□□□□ 0.73
RxrbP28704 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RxrbP28704 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RxrbP28704 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.64■□□□□ 0.73
RxrbP28704 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RxrbP28704 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RxrbP28704 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RxrbP28704 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
RxrbP28704 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RxrbP28704 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RxrbP28704 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RxrbP28704 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RxrbP28704 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.63■□□□□ 0.73
RxrbP28704 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RxrbP28704 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.63■□□□□ 0.73
RxrbP28704 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RxrbP28704 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.63■□□□□ 0.73
RxrbP28704 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RxrbP28704 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RxrbP28704 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RxrbP28704 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RxrbP28704 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RxrbP28704 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RxrbP28704 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RxrbP28704 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RxrbP28704 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RxrbP28704 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RxrbP28704 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RxrbP28704 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RxrbP28704 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RxrbP28704 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RxrbP28704 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
RxrbP28704 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.62■□□□□ 0.73
RxrbP28704 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RxrbP28704 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RxrbP28704 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RxrbP28704 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RxrbP28704 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RxrbP28704 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RxrbP28704 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.61■□□□□ 0.73
RxrbP28704 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RxrbP28704 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RxrbP28704 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RxrbP28704 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RxrbP28704 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RxrbP28704 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.61■□□□□ 0.73
RxrbP28704 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RxrbP28704 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RxrbP28704 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms