Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Irf8P23611 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Irf8P23611 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Irf8P23611 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Irf8P23611 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.17■□□□□ 0.98
Irf8P23611 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Irf8P23611 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Irf8P23611 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Irf8P23611 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Irf8P23611 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.16■□□□□ 0.98
Irf8P23611 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.16■□□□□ 0.98
Irf8P23611 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.16■□□□□ 0.98
Irf8P23611 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Irf8P23611 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Irf8P23611 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Irf8P23611 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Irf8P23611 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.15■□□□□ 0.98
Irf8P23611 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Irf8P23611 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Irf8P23611 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Irf8P23611 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Irf8P23611 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Irf8P23611 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Irf8P23611 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Irf8P23611 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.14■□□□□ 0.97
Irf8P23611 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.14■□□□□ 0.97
Irf8P23611 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Irf8P23611 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.14■□□□□ 0.97
Irf8P23611 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
Irf8P23611 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Irf8P23611 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Irf8P23611 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Irf8P23611 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Irf8P23611 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Irf8P23611 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Irf8P23611 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
Irf8P23611 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Irf8P23611 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Irf8P23611 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Irf8P23611 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Irf8P23611 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.12■□□□□ 0.97
Irf8P23611 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Irf8P23611 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Irf8P23611 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Irf8P23611 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Irf8P23611 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.12■□□□□ 0.97
Irf8P23611 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Irf8P23611 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Irf8P23611 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Irf8P23611 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Irf8P23611 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.12■□□□□ 0.97
Irf8P23611 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Irf8P23611 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Irf8P23611 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf8P23611 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf8P23611 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf8P23611 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf8P23611 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.11■□□□□ 0.97
Irf8P23611 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Irf8P23611 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Irf8P23611 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf8P23611 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Irf8P23611 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Irf8P23611 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Irf8P23611 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf8P23611 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.11■□□□□ 0.97
Irf8P23611 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Irf8P23611 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.1■□□□□ 0.97
Irf8P23611 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.1■□□□□ 0.97
Irf8P23611 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Irf8P23611 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Irf8P23611 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf8P23611 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Irf8P23611 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Irf8P23611 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.09■□□□□ 0.97
Irf8P23611 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Irf8P23611 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.09■□□□□ 0.97
Irf8P23611 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Irf8P23611 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Irf8P23611 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Irf8P23611 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.08■□□□□ 0.97
Irf8P23611 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.08■□□□□ 0.97
Irf8P23611 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.08■□□□□ 0.97
Irf8P23611 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Irf8P23611 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Irf8P23611 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms