Protein–RNA interactions for Protein: P22227

Zfp42, Zinc finger protein 42, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp42P22227 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp42P22227 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp42P22227 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp42P22227 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp42P22227 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp42P22227 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp42P22227 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp42P22227 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp42P22227 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.47■□□□□ 0.87
Zfp42P22227 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.47■□□□□ 0.87
Zfp42P22227 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp42P22227 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp42P22227 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp42P22227 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp42P22227 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp42P22227 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp42P22227 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.47■□□□□ 0.87
Zfp42P22227 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zfp42P22227 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zfp42P22227 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Zfp42P22227 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.46■□□□□ 0.87
Zfp42P22227 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zfp42P22227 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zfp42P22227 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zfp42P22227 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.45■□□□□ 0.86
Zfp42P22227 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Zfp42P22227 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zfp42P22227 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zfp42P22227 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Zfp42P22227 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zfp42P22227 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zfp42P22227 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Zfp42P22227 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Zfp42P22227 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zfp42P22227 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zfp42P22227 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Zfp42P22227 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Zfp42P22227 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Zfp42P22227 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp42P22227 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp42P22227 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Zfp42P22227 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp42P22227 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp42P22227 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
Zfp42P22227 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp42P22227 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.43■□□□□ 0.86
Zfp42P22227 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp42P22227 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Zfp42P22227 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp42P22227 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp42P22227 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp42P22227 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp42P22227 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp42P22227 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp42P22227 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp42P22227 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp42P22227 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.43■□□□□ 0.86
Zfp42P22227 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp42P22227 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp42P22227 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp42P22227 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Zfp42P22227 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp42P22227 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp42P22227 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Zfp42P22227 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp42P22227 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp42P22227 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp42P22227 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp42P22227 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp42P22227 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp42P22227 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp42P22227 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp42P22227 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp42P22227 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp42P22227 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp42P22227 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
Zfp42P22227 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp42P22227 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp42P22227 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp42P22227 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp42P22227 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp42P22227 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp42P22227 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Zfp42P22227 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zfp42P22227 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Zfp42P22227 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.4■□□□□ 0.86
Zfp42P22227 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zfp42P22227 Gm9959-201ENSMUST00000068277 390 ntBASIC20.4■□□□□ 0.86
Zfp42P22227 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Zfp42P22227 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.4■□□□□ 0.86
Zfp42P22227 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zfp42P22227 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Zfp42P22227 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Zfp42P22227 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.39■□□□□ 0.85
Zfp42P22227 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Zfp42P22227 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Zfp42P22227 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.39■□□□□ 0.85
Zfp42P22227 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Zfp42P22227 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Zfp42P22227 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms