Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hmgn1P18608 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Hmgn1P18608 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.88■□□□□ 0.45
Hmgn1P18608 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn1P18608 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.87■□□□□ 0.45
Hmgn1P18608 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.87■□□□□ 0.45
Hmgn1P18608 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn1P18608 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn1P18608 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Hmgn1P18608 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn1P18608 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn1P18608 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn1P18608 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn1P18608 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn1P18608 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn1P18608 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn1P18608 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn1P18608 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn1P18608 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hmgn1P18608 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.85■□□□□ 0.45
Hmgn1P18608 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn1P18608 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn1P18608 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.85■□□□□ 0.45
Hmgn1P18608 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.85■□□□□ 0.45
Hmgn1P18608 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn1P18608 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Hmgn1P18608 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.84■□□□□ 0.45
Hmgn1P18608 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.84■□□□□ 0.45
Hmgn1P18608 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Hmgn1P18608 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Hmgn1P18608 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Hmgn1P18608 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn1P18608 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Hmgn1P18608 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Hmgn1P18608 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgn1P18608 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgn1P18608 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Hmgn1P18608 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgn1P18608 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.83■□□□□ 0.44
Hmgn1P18608 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Hmgn1P18608 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgn1P18608 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Hmgn1P18608 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.83■□□□□ 0.44
Hmgn1P18608 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgn1P18608 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgn1P18608 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgn1P18608 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Hmgn1P18608 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgn1P18608 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgn1P18608 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.82■□□□□ 0.44
Hmgn1P18608 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgn1P18608 Gm9870-201ENSMUST00000063874 645 ntBASIC17.82■□□□□ 0.44
Hmgn1P18608 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgn1P18608 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Hmgn1P18608 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgn1P18608 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgn1P18608 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgn1P18608 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgn1P18608 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgn1P18608 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgn1P18608 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgn1P18608 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgn1P18608 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgn1P18608 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgn1P18608 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgn1P18608 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.81■□□□□ 0.44
Hmgn1P18608 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgn1P18608 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgn1P18608 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgn1P18608 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgn1P18608 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgn1P18608 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgn1P18608 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgn1P18608 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn1P18608 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn1P18608 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn1P18608 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.8■□□□□ 0.44
Hmgn1P18608 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn1P18608 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn1P18608 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.8■□□□□ 0.44
Hmgn1P18608 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Hmgn1P18608 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn1P18608 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.8■□□□□ 0.44
Hmgn1P18608 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn1P18608 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Hmgn1P18608 Cap2-205ENSMUST00000225824 1634 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms