Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fn1P11276 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Fn1P11276 Gm2559-201ENSMUST00000201323 363 ntBASIC15.28■□□□□ 0.04
Fn1P11276 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fn1P11276 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Fn1P11276 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Fn1P11276 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Fn1P11276 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fn1P11276 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fn1P11276 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
Fn1P11276 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Fn1P11276 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fn1P11276 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Fn1P11276 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Fn1P11276 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fn1P11276 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fn1P11276 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Fn1P11276 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Fn1P11276 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fn1P11276 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fn1P11276 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Fn1P11276 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.27■□□□□ 0.03
Fn1P11276 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fn1P11276 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fn1P11276 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fn1P11276 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Fn1P11276 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fn1P11276 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fn1P11276 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fn1P11276 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fn1P11276 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fn1P11276 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fn1P11276 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fn1P11276 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.26■□□□□ 0.03
Fn1P11276 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.26■□□□□ 0.03
Fn1P11276 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.26■□□□□ 0.03
Fn1P11276 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fn1P11276 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.26■□□□□ 0.03
Fn1P11276 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fn1P11276 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Fn1P11276 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fn1P11276 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.25■□□□□ 0.03
Fn1P11276 Gm6659-201ENSMUST00000174752 547 ntBASIC15.25■□□□□ 0.03
Fn1P11276 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fn1P11276 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fn1P11276 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fn1P11276 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fn1P11276 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.25■□□□□ 0.03
Fn1P11276 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.25■□□□□ 0.03
Fn1P11276 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Fn1P11276 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Fn1P11276 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fn1P11276 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fn1P11276 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Fn1P11276 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.24■□□□□ 0.03
Fn1P11276 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fn1P11276 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fn1P11276 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Fn1P11276 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fn1P11276 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fn1P11276 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fn1P11276 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fn1P11276 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fn1P11276 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fn1P11276 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fn1P11276 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fn1P11276 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fn1P11276 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fn1P11276 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Fn1P11276 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fn1P11276 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Fn1P11276 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fn1P11276 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fn1P11276 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.23■□□□□ 0.03
Fn1P11276 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.22■□□□□ 0.03
Fn1P11276 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fn1P11276 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fn1P11276 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Fn1P11276 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Fn1P11276 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.22■□□□□ 0.03
Fn1P11276 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Fn1P11276 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fn1P11276 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fn1P11276 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fn1P11276 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fn1P11276 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fn1P11276 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fn1P11276 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Fn1P11276 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.22■□□□□ 0.03
Fn1P11276 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.22■□□□□ 0.03
Fn1P11276 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fn1P11276 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fn1P11276 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Fn1P11276 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fn1P11276 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fn1P11276 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fn1P11276 Gm15378-201ENSMUST00000121894 207 ntBASIC15.21■□□□□ 0.03
Fn1P11276 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fn1P11276 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fn1P11276 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms