Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hoxc6P10629 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hoxc6P10629 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hoxc6P10629 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hoxc6P10629 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hoxc6P10629 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hoxc6P10629 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc6P10629 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc6P10629 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc6P10629 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Hoxc6P10629 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc6P10629 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc6P10629 Gm38205-201ENSMUST00000192243 258 ntBASIC21.84■■□□□ 1.09
Hoxc6P10629 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc6P10629 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.84■■□□□ 1.09
Hoxc6P10629 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Hoxc6P10629 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Hoxc6P10629 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hoxc6P10629 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hoxc6P10629 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.83■■□□□ 1.09
Hoxc6P10629 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hoxc6P10629 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.83■■□□□ 1.09
Hoxc6P10629 Gm13534-201ENSMUST00000121169 513 ntBASIC21.83■■□□□ 1.09
Hoxc6P10629 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.83■■□□□ 1.09
Hoxc6P10629 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hoxc6P10629 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hoxc6P10629 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hoxc6P10629 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hoxc6P10629 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hoxc6P10629 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hoxc6P10629 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hoxc6P10629 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hoxc6P10629 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Hoxc6P10629 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hoxc6P10629 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hoxc6P10629 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Hoxc6P10629 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Hoxc6P10629 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Hoxc6P10629 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Hoxc6P10629 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Hoxc6P10629 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hoxc6P10629 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hoxc6P10629 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.81■■□□□ 1.08
Hoxc6P10629 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.81■■□□□ 1.08
Hoxc6P10629 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.81■■□□□ 1.08
Hoxc6P10629 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.81■■□□□ 1.08
Hoxc6P10629 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hoxc6P10629 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hoxc6P10629 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hoxc6P10629 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hoxc6P10629 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hoxc6P10629 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hoxc6P10629 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.8■■□□□ 1.08
Hoxc6P10629 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.8■■□□□ 1.08
Hoxc6P10629 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hoxc6P10629 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hoxc6P10629 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.8■■□□□ 1.08
Hoxc6P10629 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.8■■□□□ 1.08
Hoxc6P10629 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hoxc6P10629 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.8■■□□□ 1.08
Hoxc6P10629 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.8■■□□□ 1.08
Hoxc6P10629 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxc6P10629 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxc6P10629 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.79■■□□□ 1.08
Hoxc6P10629 Gm6420-201ENSMUST00000193885 723 ntBASIC21.79■■□□□ 1.08
Hoxc6P10629 Gm5408-201ENSMUST00000197998 747 ntBASIC21.79■■□□□ 1.08
Hoxc6P10629 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxc6P10629 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxc6P10629 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Hoxc6P10629 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.79■■□□□ 1.08
Hoxc6P10629 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Hoxc6P10629 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxc6P10629 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Hoxc6P10629 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hoxc6P10629 Gm20049-201ENSMUST00000219950 730 ntBASIC21.78■■□□□ 1.08
Hoxc6P10629 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hoxc6P10629 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.78■■□□□ 1.08
Hoxc6P10629 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc6P10629 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc6P10629 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc6P10629 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Hoxc6P10629 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Hoxc6P10629 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc6P10629 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc6P10629 Gm10252-201ENSMUST00000209541 832 ntBASIC21.77■■□□□ 1.08
Hoxc6P10629 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc6P10629 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc6P10629 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc6P10629 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc6P10629 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc6P10629 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc6P10629 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc6P10629 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc6P10629 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc6P10629 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Hoxc6P10629 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Hoxc6P10629 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hoxc6P10629 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.76■■□□□ 1.07
Hoxc6P10629 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hoxc6P10629 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms