Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.46■□□□□ 0.55
ApoeP08226 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ApoeP08226 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ApoeP08226 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.46■□□□□ 0.55
ApoeP08226 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ApoeP08226 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
ApoeP08226 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ApoeP08226 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ApoeP08226 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ApoeP08226 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ApoeP08226 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.46■□□□□ 0.54
ApoeP08226 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ApoeP08226 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ApoeP08226 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ApoeP08226 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ApoeP08226 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ApoeP08226 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.45■□□□□ 0.54
ApoeP08226 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ApoeP08226 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ApoeP08226 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ApoeP08226 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ApoeP08226 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ApoeP08226 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ApoeP08226 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
ApoeP08226 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ApoeP08226 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
ApoeP08226 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.44■□□□□ 0.54
ApoeP08226 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ApoeP08226 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ApoeP08226 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ApoeP08226 Gm43566-201ENSMUST00000196851 808 ntBASIC18.44■□□□□ 0.54
ApoeP08226 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.44■□□□□ 0.54
ApoeP08226 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ApoeP08226 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ApoeP08226 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ApoeP08226 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ApoeP08226 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ApoeP08226 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ApoeP08226 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
ApoeP08226 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ApoeP08226 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.43■□□□□ 0.54
ApoeP08226 Gm13238-201ENSMUST00000117655 780 ntBASIC18.43■□□□□ 0.54
ApoeP08226 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ApoeP08226 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ApoeP08226 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ApoeP08226 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.42■□□□□ 0.54
ApoeP08226 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ApoeP08226 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ApoeP08226 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.42■□□□□ 0.54
ApoeP08226 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
ApoeP08226 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ApoeP08226 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.42■□□□□ 0.54
ApoeP08226 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ApoeP08226 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ApoeP08226 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ApoeP08226 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ApoeP08226 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ApoeP08226 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ApoeP08226 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ApoeP08226 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ApoeP08226 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ApoeP08226 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.41■□□□□ 0.54
ApoeP08226 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.41■□□□□ 0.54
ApoeP08226 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ApoeP08226 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.41■□□□□ 0.54
ApoeP08226 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ApoeP08226 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ApoeP08226 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ApoeP08226 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ApoeP08226 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.41■□□□□ 0.54
ApoeP08226 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ApoeP08226 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ApoeP08226 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ApoeP08226 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ApoeP08226 Gm43530-201ENSMUST00000195920 274 ntBASIC18.4■□□□□ 0.54
ApoeP08226 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ApoeP08226 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ApoeP08226 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ApoeP08226 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ApoeP08226 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
ApoeP08226 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ApoeP08226 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ApoeP08226 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.39■□□□□ 0.53
ApoeP08226 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.39■□□□□ 0.53
ApoeP08226 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ApoeP08226 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.39■□□□□ 0.53
ApoeP08226 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ApoeP08226 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ApoeP08226 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ApoeP08226 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ApoeP08226 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ApoeP08226 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ApoeP08226 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ApoeP08226 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ApoeP08226 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ApoeP08226 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ApoeP08226 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ApoeP08226 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ApoeP08226 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
ApoeP08226 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms