Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Col4a2P08122 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a2P08122 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a2P08122 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a2P08122 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.49■□□□□ 0.55
Col4a2P08122 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a2P08122 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col4a2P08122 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a2P08122 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.49■□□□□ 0.55
Col4a2P08122 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a2P08122 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col4a2P08122 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a2P08122 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col4a2P08122 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a2P08122 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.49■□□□□ 0.55
Col4a2P08122 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a2P08122 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a2P08122 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a2P08122 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.49■□□□□ 0.55
Col4a2P08122 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col4a2P08122 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a2P08122 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.48■□□□□ 0.55
Col4a2P08122 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a2P08122 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a2P08122 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a2P08122 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a2P08122 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a2P08122 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a2P08122 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a2P08122 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a2P08122 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a2P08122 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a2P08122 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Col4a2P08122 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a2P08122 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a2P08122 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a2P08122 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a2P08122 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a2P08122 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.47■□□□□ 0.55
Col4a2P08122 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a2P08122 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a2P08122 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a2P08122 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Col4a2P08122 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a2P08122 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a2P08122 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a2P08122 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a2P08122 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a2P08122 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a2P08122 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a2P08122 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.46■□□□□ 0.55
Col4a2P08122 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.46■□□□□ 0.55
Col4a2P08122 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
Col4a2P08122 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a2P08122 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a2P08122 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a2P08122 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a2P08122 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a2P08122 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a2P08122 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a2P08122 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a2P08122 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Col4a2P08122 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a2P08122 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a2P08122 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Col4a2P08122 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Col4a2P08122 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a2P08122 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a2P08122 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a2P08122 Gm20760-201ENSMUST00000179197 648 ntBASIC18.43■□□□□ 0.54
Col4a2P08122 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.43■□□□□ 0.54
Col4a2P08122 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.43■□□□□ 0.54
Col4a2P08122 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a2P08122 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a2P08122 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Col4a2P08122 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Col4a2P08122 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a2P08122 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Col4a2P08122 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a2P08122 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a2P08122 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.43■□□□□ 0.54
Col4a2P08122 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.43■□□□□ 0.54
Col4a2P08122 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a2P08122 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a2P08122 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a2P08122 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a2P08122 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a2P08122 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a2P08122 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a2P08122 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Col4a2P08122 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.42■□□□□ 0.54
Col4a2P08122 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.42■□□□□ 0.54
Col4a2P08122 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a2P08122 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.42■□□□□ 0.54
Col4a2P08122 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a2P08122 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a2P08122 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a2P08122 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a2P08122 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Col4a2P08122 Gm12527-201ENSMUST00000117967 564 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms