Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TnfP06804 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TnfP06804 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TnfP06804 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.83■□□□□ 0.93
TnfP06804 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TnfP06804 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TnfP06804 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TnfP06804 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TnfP06804 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
TnfP06804 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
TnfP06804 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TnfP06804 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TnfP06804 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TnfP06804 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TnfP06804 Reep4-203ENSMUST00000226563 1444 ntBASIC20.82■□□□□ 0.92
TnfP06804 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TnfP06804 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TnfP06804 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.82■□□□□ 0.92
TnfP06804 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TnfP06804 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TnfP06804 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TnfP06804 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TnfP06804 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.81■□□□□ 0.92
TnfP06804 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.81■□□□□ 0.92
TnfP06804 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TnfP06804 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TnfP06804 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TnfP06804 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TnfP06804 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.81■□□□□ 0.92
TnfP06804 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.81■□□□□ 0.92
TnfP06804 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.81■□□□□ 0.92
TnfP06804 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TnfP06804 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TnfP06804 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TnfP06804 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TnfP06804 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.8■□□□□ 0.92
TnfP06804 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TnfP06804 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TnfP06804 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TnfP06804 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TnfP06804 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.8■□□□□ 0.92
TnfP06804 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.8■□□□□ 0.92
TnfP06804 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TnfP06804 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TnfP06804 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TnfP06804 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TnfP06804 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TnfP06804 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TnfP06804 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.79■□□□□ 0.92
TnfP06804 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TnfP06804 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TnfP06804 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TnfP06804 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.79■□□□□ 0.92
TnfP06804 Gm13234-201ENSMUST00000120010 747 ntBASIC20.79■□□□□ 0.92
TnfP06804 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TnfP06804 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.79■□□□□ 0.92
TnfP06804 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.79■□□□□ 0.92
TnfP06804 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TnfP06804 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.79■□□□□ 0.92
TnfP06804 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TnfP06804 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TnfP06804 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TnfP06804 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
TnfP06804 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TnfP06804 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TnfP06804 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TnfP06804 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TnfP06804 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TnfP06804 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TnfP06804 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.77■□□□□ 0.92
TnfP06804 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TnfP06804 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TnfP06804 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TnfP06804 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TnfP06804 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TnfP06804 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TnfP06804 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TnfP06804 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TnfP06804 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TnfP06804 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TnfP06804 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TnfP06804 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TnfP06804 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TnfP06804 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TnfP06804 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.76■□□□□ 0.91
TnfP06804 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TnfP06804 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TnfP06804 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TnfP06804 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TnfP06804 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TnfP06804 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.76■□□□□ 0.91
TnfP06804 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TnfP06804 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TnfP06804 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TnfP06804 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TnfP06804 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TnfP06804 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TnfP06804 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TnfP06804 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TnfP06804 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms