Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxa3P02831 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxa3P02831 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxa3P02831 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxa3P02831 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Hoxa3P02831 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxa3P02831 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxa3P02831 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.32■□□□□ 0.2
Hoxa3P02831 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxa3P02831 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxa3P02831 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.32■□□□□ 0.2
Hoxa3P02831 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxa3P02831 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxa3P02831 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxa3P02831 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxa3P02831 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Hoxa3P02831 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxa3P02831 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxa3P02831 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Hoxa3P02831 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.31■□□□□ 0.2
Hoxa3P02831 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxa3P02831 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxa3P02831 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxa3P02831 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.31■□□□□ 0.2
Hoxa3P02831 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.31■□□□□ 0.2
Hoxa3P02831 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.31■□□□□ 0.2
Hoxa3P02831 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.31■□□□□ 0.2
Hoxa3P02831 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
Hoxa3P02831 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxa3P02831 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Hoxa3P02831 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.31■□□□□ 0.2
Hoxa3P02831 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.31■□□□□ 0.2
Hoxa3P02831 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hoxa3P02831 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxa3P02831 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxa3P02831 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hoxa3P02831 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Hoxa3P02831 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxa3P02831 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hoxa3P02831 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hoxa3P02831 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.3■□□□□ 0.2
Hoxa3P02831 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa3P02831 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hoxa3P02831 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa3P02831 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa3P02831 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.3■□□□□ 0.2
Hoxa3P02831 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa3P02831 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.3■□□□□ 0.2
Hoxa3P02831 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa3P02831 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa3P02831 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.3■□□□□ 0.2
Hoxa3P02831 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa3P02831 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa3P02831 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa3P02831 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa3P02831 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa3P02831 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa3P02831 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.29■□□□□ 0.2
Hoxa3P02831 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa3P02831 Gm10493-201ENSMUST00000097270 612 ntBASIC16.29■□□□□ 0.2
Hoxa3P02831 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa3P02831 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa3P02831 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa3P02831 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hoxa3P02831 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa3P02831 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa3P02831 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa3P02831 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hoxa3P02831 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa3P02831 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa3P02831 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa3P02831 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa3P02831 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa3P02831 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa3P02831 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa3P02831 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa3P02831 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa3P02831 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa3P02831 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa3P02831 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.28■□□□□ 0.2
Hoxa3P02831 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa3P02831 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa3P02831 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Hoxa3P02831 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxa3P02831 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxa3P02831 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxa3P02831 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxa3P02831 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxa3P02831 Gm26571-201ENSMUST00000181399 666 ntBASIC16.27■□□□□ 0.2
Hoxa3P02831 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxa3P02831 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxa3P02831 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxa3P02831 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.27■□□□□ 0.19
Hoxa3P02831 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxa3P02831 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxa3P02831 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa3P02831 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa3P02831 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa3P02831 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.26■□□□□ 0.19
Hoxa3P02831 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms