Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sp1O89090 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sp1O89090 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sp1O89090 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sp1O89090 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.87■□□□□ 0.77
Sp1O89090 Gm42778-201ENSMUST00000199644 553 ntBASIC19.87■□□□□ 0.77
Sp1O89090 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sp1O89090 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sp1O89090 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sp1O89090 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sp1O89090 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sp1O89090 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sp1O89090 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Sp1O89090 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sp1O89090 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sp1O89090 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sp1O89090 Gm42569-201ENSMUST00000200539 472 ntBASIC19.86■□□□□ 0.77
Sp1O89090 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Sp1O89090 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sp1O89090 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sp1O89090 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sp1O89090 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sp1O89090 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Sp1O89090 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sp1O89090 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.85■□□□□ 0.77
Sp1O89090 Gm18671-201ENSMUST00000214826 683 ntBASIC19.85■□□□□ 0.77
Sp1O89090 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sp1O89090 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sp1O89090 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Sp1O89090 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sp1O89090 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.84■□□□□ 0.77
Sp1O89090 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sp1O89090 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sp1O89090 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.84■□□□□ 0.77
Sp1O89090 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sp1O89090 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.84■□□□□ 0.77
Sp1O89090 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sp1O89090 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Sp1O89090 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sp1O89090 Reep4-203ENSMUST00000226563 1444 ntBASIC19.84■□□□□ 0.77
Sp1O89090 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Sp1O89090 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sp1O89090 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Sp1O89090 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sp1O89090 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sp1O89090 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sp1O89090 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sp1O89090 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sp1O89090 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.83■□□□□ 0.77
Sp1O89090 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sp1O89090 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.83■□□□□ 0.77
Sp1O89090 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sp1O89090 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sp1O89090 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.76
Sp1O89090 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sp1O89090 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sp1O89090 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sp1O89090 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sp1O89090 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.82■□□□□ 0.76
Sp1O89090 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.82■□□□□ 0.76
Sp1O89090 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sp1O89090 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sp1O89090 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sp1O89090 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sp1O89090 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sp1O89090 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sp1O89090 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.81■□□□□ 0.76
Sp1O89090 Gm7291-201ENSMUST00000199147 382 ntBASIC19.81■□□□□ 0.76
Sp1O89090 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sp1O89090 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sp1O89090 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sp1O89090 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sp1O89090 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.8■□□□□ 0.76
Sp1O89090 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Sp1O89090 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.8■□□□□ 0.76
Sp1O89090 Gm13234-201ENSMUST00000120010 747 ntBASIC19.8■□□□□ 0.76
Sp1O89090 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.8■□□□□ 0.76
Sp1O89090 Gm27405-201ENSMUST00000184201 112 ntBASIC19.8■□□□□ 0.76
Sp1O89090 AV356131-201ENSMUST00000206201 750 ntBASIC19.8■□□□□ 0.76
Sp1O89090 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sp1O89090 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sp1O89090 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sp1O89090 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sp1O89090 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sp1O89090 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sp1O89090 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.79■□□□□ 0.76
Sp1O89090 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sp1O89090 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sp1O89090 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sp1O89090 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sp1O89090 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sp1O89090 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sp1O89090 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sp1O89090 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sp1O89090 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sp1O89090 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sp1O89090 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sp1O89090 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sp1O89090 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sp1O89090 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms