Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn1O88704 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Hcn1O88704 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn1O88704 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn1O88704 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn1O88704 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn1O88704 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn1O88704 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.61■□□□□ 0.57
Hcn1O88704 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn1O88704 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn1O88704 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hcn1O88704 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn1O88704 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hcn1O88704 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn1O88704 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.61■□□□□ 0.57
Hcn1O88704 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn1O88704 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Hcn1O88704 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn1O88704 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn1O88704 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.61■□□□□ 0.57
Hcn1O88704 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn1O88704 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcn1O88704 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcn1O88704 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.6■□□□□ 0.57
Hcn1O88704 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcn1O88704 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Hcn1O88704 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.6■□□□□ 0.57
Hcn1O88704 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Hcn1O88704 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcn1O88704 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcn1O88704 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hcn1O88704 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn1O88704 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn1O88704 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn1O88704 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn1O88704 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn1O88704 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.59■□□□□ 0.57
Hcn1O88704 Gm45417-201ENSMUST00000209533 758 ntBASIC18.59■□□□□ 0.57
Hcn1O88704 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.59■□□□□ 0.57
Hcn1O88704 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn1O88704 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn1O88704 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn1O88704 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn1O88704 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn1O88704 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcn1O88704 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hcn1O88704 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hcn1O88704 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hcn1O88704 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hcn1O88704 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Hcn1O88704 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hcn1O88704 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hcn1O88704 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hcn1O88704 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hcn1O88704 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Hcn1O88704 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hcn1O88704 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hcn1O88704 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hcn1O88704 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Hcn1O88704 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hcn1O88704 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.57■□□□□ 0.56
Hcn1O88704 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Hcn1O88704 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn1O88704 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn1O88704 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Hcn1O88704 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn1O88704 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn1O88704 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn1O88704 Gm43137-201ENSMUST00000198052 594 ntBASIC18.57■□□□□ 0.56
Hcn1O88704 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn1O88704 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn1O88704 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hcn1O88704 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcn1O88704 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hcn1O88704 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.56■□□□□ 0.56
Hcn1O88704 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.56■□□□□ 0.56
Hcn1O88704 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcn1O88704 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcn1O88704 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.56■□□□□ 0.56
Hcn1O88704 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcn1O88704 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hcn1O88704 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hcn1O88704 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn1O88704 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn1O88704 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Hcn1O88704 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn1O88704 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn1O88704 Gm15039-201ENSMUST00000118914 875 ntBASIC18.55■□□□□ 0.56
Hcn1O88704 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hcn1O88704 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.55■□□□□ 0.56
Hcn1O88704 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn1O88704 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn1O88704 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn1O88704 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn1O88704 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hcn1O88704 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.54■□□□□ 0.56
Hcn1O88704 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn1O88704 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hcn1O88704 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.54■□□□□ 0.56
Hcn1O88704 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms