Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.94■■□□□ 1.1
Pcdha4O88689 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha4O88689 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha4O88689 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha4O88689 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha4O88689 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Pcdha4O88689 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha4O88689 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Pcdha4O88689 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdha4O88689 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
Pcdha4O88689 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha4O88689 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha4O88689 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha4O88689 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.92■■□□□ 1.1
Pcdha4O88689 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha4O88689 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha4O88689 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha4O88689 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha4O88689 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha4O88689 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.91■■□□□ 1.1
Pcdha4O88689 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Pcdha4O88689 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Pcdha4O88689 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha4O88689 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.91■■□□□ 1.1
Pcdha4O88689 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Pcdha4O88689 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.91■■□□□ 1.1
Pcdha4O88689 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Pcdha4O88689 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha4O88689 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha4O88689 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.9■■□□□ 1.1
Pcdha4O88689 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Pcdha4O88689 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha4O88689 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Pcdha4O88689 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.9■■□□□ 1.1
Pcdha4O88689 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha4O88689 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha4O88689 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.9■■□□□ 1.1
Pcdha4O88689 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdha4O88689 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdha4O88689 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Pcdha4O88689 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.89■■□□□ 1.09
Pcdha4O88689 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.89■■□□□ 1.09
Pcdha4O88689 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha4O88689 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha4O88689 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha4O88689 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha4O88689 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha4O88689 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha4O88689 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Pcdha4O88689 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha4O88689 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha4O88689 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha4O88689 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha4O88689 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha4O88689 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha4O88689 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha4O88689 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha4O88689 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha4O88689 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.87■■□□□ 1.09
Pcdha4O88689 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha4O88689 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha4O88689 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha4O88689 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha4O88689 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha4O88689 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha4O88689 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha4O88689 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha4O88689 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha4O88689 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha4O88689 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha4O88689 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha4O88689 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Pcdha4O88689 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha4O88689 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha4O88689 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcdha4O88689 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha4O88689 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha4O88689 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha4O88689 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.84■■□□□ 1.09
Pcdha4O88689 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Pcdha4O88689 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha4O88689 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha4O88689 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha4O88689 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha4O88689 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha4O88689 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
Pcdha4O88689 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.83■■□□□ 1.09
Pcdha4O88689 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha4O88689 Gm27801-201ENSMUST00000184174 223 ntBASIC21.83■■□□□ 1.09
Pcdha4O88689 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha4O88689 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha4O88689 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Pcdha4O88689 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.83■■□□□ 1.09
Pcdha4O88689 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdha4O88689 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.83■■□□□ 1.08
Pcdha4O88689 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.83■■□□□ 1.08
Pcdha4O88689 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.82■■□□□ 1.08
Pcdha4O88689 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha4O88689 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Pcdha4O88689 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms