Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.68■■□□□ 1.22
Sema3fO88632 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Sema3fO88632 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Sema3fO88632 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Sema3fO88632 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Sema3fO88632 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sema3fO88632 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.67■■□□□ 1.22
Sema3fO88632 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sema3fO88632 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
Sema3fO88632 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sema3fO88632 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.66■■□□□ 1.22
Sema3fO88632 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sema3fO88632 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sema3fO88632 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sema3fO88632 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.66■■□□□ 1.22
Sema3fO88632 Gm13234-201ENSMUST00000120010 747 ntBASIC22.66■■□□□ 1.22
Sema3fO88632 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sema3fO88632 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sema3fO88632 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Sema3fO88632 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Sema3fO88632 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sema3fO88632 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
Sema3fO88632 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.65■■□□□ 1.22
Sema3fO88632 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sema3fO88632 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sema3fO88632 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.65■■□□□ 1.22
Sema3fO88632 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Sema3fO88632 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.65■■□□□ 1.22
Sema3fO88632 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.65■■□□□ 1.22
Sema3fO88632 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.65■■□□□ 1.22
Sema3fO88632 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sema3fO88632 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sema3fO88632 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
Sema3fO88632 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sema3fO88632 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sema3fO88632 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
Sema3fO88632 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.64■■□□□ 1.21
Sema3fO88632 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sema3fO88632 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sema3fO88632 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sema3fO88632 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sema3fO88632 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
Sema3fO88632 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Sema3fO88632 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.63■■□□□ 1.21
Sema3fO88632 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sema3fO88632 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Sema3fO88632 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sema3fO88632 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sema3fO88632 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Sema3fO88632 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.63■■□□□ 1.21
Sema3fO88632 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sema3fO88632 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sema3fO88632 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Sema3fO88632 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sema3fO88632 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sema3fO88632 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Sema3fO88632 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sema3fO88632 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.62■■□□□ 1.21
Sema3fO88632 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.62■■□□□ 1.21
Sema3fO88632 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sema3fO88632 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sema3fO88632 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.61■■□□□ 1.21
Sema3fO88632 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.61■■□□□ 1.21
Sema3fO88632 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sema3fO88632 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sema3fO88632 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Sema3fO88632 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Sema3fO88632 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.61■■□□□ 1.21
Sema3fO88632 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.61■■□□□ 1.21
Sema3fO88632 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sema3fO88632 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sema3fO88632 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.6■■□□□ 1.21
Sema3fO88632 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sema3fO88632 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.6■■□□□ 1.21
Sema3fO88632 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sema3fO88632 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sema3fO88632 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Sema3fO88632 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.6■■□□□ 1.21
Sema3fO88632 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Sema3fO88632 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sema3fO88632 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sema3fO88632 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sema3fO88632 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sema3fO88632 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sema3fO88632 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Sema3fO88632 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.58■■□□□ 1.21
Sema3fO88632 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.58■■□□□ 1.21
Sema3fO88632 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Sema3fO88632 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Sema3fO88632 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Sema3fO88632 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Sema3fO88632 AA386476-201ENSMUST00000098781 1665 ntBASIC22.58■■□□□ 1.2
Sema3fO88632 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Sema3fO88632 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Sema3fO88632 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sema3fO88632 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sema3fO88632 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.57■■□□□ 1.2
Sema3fO88632 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.57■■□□□ 1.2
Sema3fO88632 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sema3fO88632 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms