Protein–RNA interactions for Protein: O88552

Cldn2, Claudin-2, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn2O88552 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn2O88552 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn2O88552 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn2O88552 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn2O88552 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cldn2O88552 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cldn2O88552 Gm12933-201ENSMUST00000120203 872 ntBASIC20■□□□□ 0.79
Cldn2O88552 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20■□□□□ 0.79
Cldn2O88552 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cldn2O88552 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cldn2O88552 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn2O88552 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Cldn2O88552 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20■□□□□ 0.79
Cldn2O88552 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn2O88552 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cldn2O88552 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn2O88552 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn2O88552 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.99■□□□□ 0.79
Cldn2O88552 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.99■□□□□ 0.79
Cldn2O88552 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Cldn2O88552 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn2O88552 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn2O88552 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn2O88552 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.99■□□□□ 0.79
Cldn2O88552 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cldn2O88552 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn2O88552 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn2O88552 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn2O88552 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.99■□□□□ 0.79
Cldn2O88552 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn2O88552 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn2O88552 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
Cldn2O88552 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn2O88552 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.98■□□□□ 0.79
Cldn2O88552 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Cldn2O88552 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn2O88552 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.98■□□□□ 0.79
Cldn2O88552 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn2O88552 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cldn2O88552 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn2O88552 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn2O88552 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn2O88552 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.97■□□□□ 0.79
Cldn2O88552 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cldn2O88552 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cldn2O88552 Gm38205-201ENSMUST00000192243 258 ntBASIC19.97■□□□□ 0.79
Cldn2O88552 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.97■□□□□ 0.79
Cldn2O88552 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn2O88552 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn2O88552 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cldn2O88552 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn2O88552 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn2O88552 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.96■□□□□ 0.79
Cldn2O88552 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn2O88552 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cldn2O88552 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn2O88552 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn2O88552 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.96■□□□□ 0.79
Cldn2O88552 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn2O88552 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Cldn2O88552 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn2O88552 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn2O88552 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn2O88552 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn2O88552 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.95■□□□□ 0.78
Cldn2O88552 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.95■□□□□ 0.78
Cldn2O88552 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn2O88552 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn2O88552 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn2O88552 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn2O88552 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn2O88552 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.94■□□□□ 0.78
Cldn2O88552 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn2O88552 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn2O88552 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn2O88552 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn2O88552 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn2O88552 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cldn2O88552 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.93■□□□□ 0.78
Cldn2O88552 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Cldn2O88552 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn2O88552 AA386476-201ENSMUST00000098781 1665 ntBASIC19.93■□□□□ 0.78
Cldn2O88552 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn2O88552 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn2O88552 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn2O88552 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn2O88552 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn2O88552 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn2O88552 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn2O88552 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Cldn2O88552 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.92■□□□□ 0.78
Cldn2O88552 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.92■□□□□ 0.78
Cldn2O88552 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Cldn2O88552 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.92■□□□□ 0.78
Cldn2O88552 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn2O88552 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cldn2O88552 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.92■□□□□ 0.78
Cldn2O88552 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn2O88552 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Cldn2O88552 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms