Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tgfbr3O88393 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tgfbr3O88393 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tgfbr3O88393 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tgfbr3O88393 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tgfbr3O88393 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tgfbr3O88393 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.65■□□□□ 0.58
Tgfbr3O88393 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.65■□□□□ 0.58
Tgfbr3O88393 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tgfbr3O88393 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tgfbr3O88393 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tgfbr3O88393 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tgfbr3O88393 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tgfbr3O88393 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.64■□□□□ 0.58
Tgfbr3O88393 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tgfbr3O88393 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tgfbr3O88393 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tgfbr3O88393 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tgfbr3O88393 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tgfbr3O88393 Gm38205-201ENSMUST00000192243 258 ntBASIC18.64■□□□□ 0.57
Tgfbr3O88393 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.64■□□□□ 0.57
Tgfbr3O88393 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tgfbr3O88393 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.63■□□□□ 0.57
Tgfbr3O88393 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr3O88393 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr3O88393 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.63■□□□□ 0.57
Tgfbr3O88393 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr3O88393 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.63■□□□□ 0.57
Tgfbr3O88393 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr3O88393 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.63■□□□□ 0.57
Tgfbr3O88393 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr3O88393 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr3O88393 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tgfbr3O88393 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr3O88393 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr3O88393 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr3O88393 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tgfbr3O88393 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tgfbr3O88393 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.62■□□□□ 0.57
Tgfbr3O88393 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tgfbr3O88393 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tgfbr3O88393 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Tgfbr3O88393 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.62■□□□□ 0.57
Tgfbr3O88393 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tgfbr3O88393 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.62■□□□□ 0.57
Tgfbr3O88393 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tgfbr3O88393 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tgfbr3O88393 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tgfbr3O88393 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tgfbr3O88393 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tgfbr3O88393 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tgfbr3O88393 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Tgfbr3O88393 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tgfbr3O88393 Gm13148-201ENSMUST00000118892 745 ntBASIC18.61■□□□□ 0.57
Tgfbr3O88393 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Tgfbr3O88393 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tgfbr3O88393 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tgfbr3O88393 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tgfbr3O88393 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tgfbr3O88393 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tgfbr3O88393 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.6■□□□□ 0.57
Tgfbr3O88393 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tgfbr3O88393 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tgfbr3O88393 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tgfbr3O88393 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Tgfbr3O88393 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tgfbr3O88393 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tgfbr3O88393 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tgfbr3O88393 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tgfbr3O88393 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Tgfbr3O88393 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.59■□□□□ 0.57
Tgfbr3O88393 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.59■□□□□ 0.57
Tgfbr3O88393 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tgfbr3O88393 Gm12527-201ENSMUST00000117967 564 ntBASIC18.59■□□□□ 0.57
Tgfbr3O88393 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.59■□□□□ 0.57
Tgfbr3O88393 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tgfbr3O88393 Gm6365-201ENSMUST00000054711 744 ntBASIC18.59■□□□□ 0.57
Tgfbr3O88393 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tgfbr3O88393 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tgfbr3O88393 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tgfbr3O88393 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tgfbr3O88393 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tgfbr3O88393 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tgfbr3O88393 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Tgfbr3O88393 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tgfbr3O88393 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.58■□□□□ 0.57
Tgfbr3O88393 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tgfbr3O88393 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tgfbr3O88393 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tgfbr3O88393 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.58■□□□□ 0.56
Tgfbr3O88393 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.58■□□□□ 0.56
Tgfbr3O88393 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tgfbr3O88393 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tgfbr3O88393 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tgfbr3O88393 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Tgfbr3O88393 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms