Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc4a4O88343 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc4a4O88343 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc4a4O88343 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Slc4a4O88343 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc4a4O88343 Gm42911-201ENSMUST00000199360 1630 ntBASIC23.15■■□□□ 1.3
Slc4a4O88343 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc4a4O88343 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.15■■□□□ 1.3
Slc4a4O88343 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.15■■□□□ 1.3
Slc4a4O88343 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc4a4O88343 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.15■■□□□ 1.3
Slc4a4O88343 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Slc4a4O88343 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
Slc4a4O88343 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc4a4O88343 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc4a4O88343 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Slc4a4O88343 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Slc4a4O88343 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Slc4a4O88343 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Slc4a4O88343 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Slc4a4O88343 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Slc4a4O88343 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Slc4a4O88343 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc4a4O88343 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Slc4a4O88343 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Slc4a4O88343 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc4a4O88343 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc4a4O88343 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc4a4O88343 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc4a4O88343 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc4a4O88343 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.12■■□□□ 1.29
Slc4a4O88343 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.12■■□□□ 1.29
Slc4a4O88343 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
Slc4a4O88343 Gm27801-201ENSMUST00000184174 223 ntBASIC23.12■■□□□ 1.29
Slc4a4O88343 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.12■■□□□ 1.29
Slc4a4O88343 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.12■■□□□ 1.29
Slc4a4O88343 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.12■■□□□ 1.29
Slc4a4O88343 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc4a4O88343 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.12■■□□□ 1.29
Slc4a4O88343 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc4a4O88343 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc4a4O88343 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Slc4a4O88343 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.11■■□□□ 1.29
Slc4a4O88343 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc4a4O88343 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.11■■□□□ 1.29
Slc4a4O88343 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC23.11■■□□□ 1.29
Slc4a4O88343 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc4a4O88343 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc4a4O88343 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Slc4a4O88343 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slc4a4O88343 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slc4a4O88343 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slc4a4O88343 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.1■■□□□ 1.29
Slc4a4O88343 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slc4a4O88343 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.1■■□□□ 1.29
Slc4a4O88343 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slc4a4O88343 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.1■■□□□ 1.29
Slc4a4O88343 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Slc4a4O88343 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Slc4a4O88343 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Slc4a4O88343 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Slc4a4O88343 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Slc4a4O88343 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Slc4a4O88343 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
Slc4a4O88343 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
Slc4a4O88343 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Slc4a4O88343 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Slc4a4O88343 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Slc4a4O88343 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc4a4O88343 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Slc4a4O88343 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.07■■□□□ 1.28
Slc4a4O88343 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc4a4O88343 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC23.07■■□□□ 1.28
Slc4a4O88343 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc4a4O88343 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Slc4a4O88343 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc4a4O88343 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Slc4a4O88343 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.06■■□□□ 1.28
Slc4a4O88343 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Slc4a4O88343 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc4a4O88343 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc4a4O88343 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc4a4O88343 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC23.05■■□□□ 1.28
Slc4a4O88343 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Slc4a4O88343 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Slc4a4O88343 Gm42642-201ENSMUST00000200683 355 ntBASIC23.05■■□□□ 1.28
Slc4a4O88343 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc4a4O88343 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc4a4O88343 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc4a4O88343 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc4a4O88343 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Slc4a4O88343 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC23.04■■□□□ 1.28
Slc4a4O88343 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Slc4a4O88343 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc4a4O88343 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Slc4a4O88343 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.04■■□□□ 1.28
Slc4a4O88343 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc4a4O88343 Gm9988-201ENSMUST00000069786 435 ntBASIC23.04■■□□□ 1.28
Slc4a4O88343 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc4a4O88343 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms