Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ttc3O88196 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ttc3O88196 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ttc3O88196 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.71■□□□□ 0.91
Ttc3O88196 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ttc3O88196 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.71■□□□□ 0.91
Ttc3O88196 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ttc3O88196 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ttc3O88196 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ttc3O88196 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ttc3O88196 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ttc3O88196 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.7■□□□□ 0.9
Ttc3O88196 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.7■□□□□ 0.9
Ttc3O88196 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ttc3O88196 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Ttc3O88196 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.7■□□□□ 0.9
Ttc3O88196 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.7■□□□□ 0.9
Ttc3O88196 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ttc3O88196 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ttc3O88196 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ttc3O88196 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ttc3O88196 Gm13146-201ENSMUST00000118508 780 ntBASIC20.69■□□□□ 0.9
Ttc3O88196 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ttc3O88196 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.69■□□□□ 0.9
Ttc3O88196 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ttc3O88196 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ttc3O88196 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ttc3O88196 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ttc3O88196 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ttc3O88196 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ttc3O88196 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ttc3O88196 Gm13148-201ENSMUST00000118892 745 ntBASIC20.68■□□□□ 0.9
Ttc3O88196 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ttc3O88196 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ttc3O88196 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ttc3O88196 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ttc3O88196 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.68■□□□□ 0.9
Ttc3O88196 Gm7514-201ENSMUST00000209475 934 ntBASIC20.67■□□□□ 0.9
Ttc3O88196 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ttc3O88196 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc3O88196 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ttc3O88196 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc3O88196 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc3O88196 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc3O88196 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc3O88196 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.66■□□□□ 0.9
Ttc3O88196 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.66■□□□□ 0.9
Ttc3O88196 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ttc3O88196 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.66■□□□□ 0.9
Ttc3O88196 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc3O88196 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ttc3O88196 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.66■□□□□ 0.9
Ttc3O88196 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc3O88196 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc3O88196 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Ttc3O88196 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ttc3O88196 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc3O88196 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ttc3O88196 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc3O88196 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ttc3O88196 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc3O88196 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.65■□□□□ 0.9
Ttc3O88196 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc3O88196 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc3O88196 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ttc3O88196 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ttc3O88196 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.64■□□□□ 0.89
Ttc3O88196 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ttc3O88196 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ttc3O88196 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc3O88196 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.63■□□□□ 0.89
Ttc3O88196 Gm27011-201ENSMUST00000182352 972 ntBASIC20.63■□□□□ 0.89
Ttc3O88196 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc3O88196 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.63■□□□□ 0.89
Ttc3O88196 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc3O88196 Gm38205-201ENSMUST00000192243 258 ntBASIC20.63■□□□□ 0.89
Ttc3O88196 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc3O88196 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc3O88196 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc3O88196 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.62■□□□□ 0.89
Ttc3O88196 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc3O88196 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc3O88196 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ttc3O88196 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Ttc3O88196 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc3O88196 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc3O88196 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc3O88196 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc3O88196 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc3O88196 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc3O88196 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc3O88196 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.61■□□□□ 0.89
Ttc3O88196 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.61■□□□□ 0.89
Ttc3O88196 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.61■□□□□ 0.89
Ttc3O88196 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc3O88196 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc3O88196 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc3O88196 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc3O88196 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc3O88196 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms