Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pdlim1O70400 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim1O70400 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim1O70400 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim1O70400 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim1O70400 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim1O70400 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim1O70400 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pdlim1O70400 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim1O70400 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.34■□□□□ 0.69
Pdlim1O70400 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim1O70400 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim1O70400 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pdlim1O70400 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim1O70400 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Pdlim1O70400 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim1O70400 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.34■□□□□ 0.69
Pdlim1O70400 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim1O70400 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim1O70400 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim1O70400 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.33■□□□□ 0.68
Pdlim1O70400 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.33■□□□□ 0.68
Pdlim1O70400 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.33■□□□□ 0.68
Pdlim1O70400 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdlim1O70400 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pdlim1O70400 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pdlim1O70400 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdlim1O70400 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdlim1O70400 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdlim1O70400 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdlim1O70400 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim1O70400 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pdlim1O70400 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim1O70400 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim1O70400 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim1O70400 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim1O70400 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim1O70400 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim1O70400 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim1O70400 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.32■□□□□ 0.68
Pdlim1O70400 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim1O70400 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim1O70400 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pdlim1O70400 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim1O70400 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim1O70400 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim1O70400 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim1O70400 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Pdlim1O70400 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim1O70400 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Pdlim1O70400 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim1O70400 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.31■□□□□ 0.68
Pdlim1O70400 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim1O70400 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim1O70400 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim1O70400 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.3■□□□□ 0.68
Pdlim1O70400 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim1O70400 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim1O70400 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim1O70400 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim1O70400 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Pdlim1O70400 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim1O70400 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.29■□□□□ 0.68
Pdlim1O70400 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pdlim1O70400 Gm43060-201ENSMUST00000200621 289 ntBASIC19.29■□□□□ 0.68
Pdlim1O70400 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim1O70400 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.29■□□□□ 0.68
Pdlim1O70400 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim1O70400 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim1O70400 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pdlim1O70400 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim1O70400 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim1O70400 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim1O70400 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Pdlim1O70400 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim1O70400 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim1O70400 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pdlim1O70400 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim1O70400 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pdlim1O70400 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim1O70400 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim1O70400 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim1O70400 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim1O70400 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pdlim1O70400 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.27■□□□□ 0.68
Pdlim1O70400 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pdlim1O70400 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim1O70400 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim1O70400 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim1O70400 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.27■□□□□ 0.68
Pdlim1O70400 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdlim1O70400 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim1O70400 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.26■□□□□ 0.67
Pdlim1O70400 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim1O70400 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pdlim1O70400 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim1O70400 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.26■□□□□ 0.67
Pdlim1O70400 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim1O70400 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim1O70400 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms