Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.4■□□□□ 0.38
SgceO70258 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SgceO70258 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SgceO70258 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.39■□□□□ 0.37
SgceO70258 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.39■□□□□ 0.37
SgceO70258 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgceO70258 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SgceO70258 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgceO70258 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SgceO70258 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgceO70258 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgceO70258 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.39■□□□□ 0.37
SgceO70258 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.39■□□□□ 0.37
SgceO70258 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SgceO70258 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SgceO70258 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SgceO70258 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgceO70258 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgceO70258 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SgceO70258 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SgceO70258 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.38■□□□□ 0.37
SgceO70258 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgceO70258 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgceO70258 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
SgceO70258 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgceO70258 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgceO70258 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgceO70258 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SgceO70258 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgceO70258 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgceO70258 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SgceO70258 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.37■□□□□ 0.37
SgceO70258 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.37■□□□□ 0.37
SgceO70258 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SgceO70258 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.37■□□□□ 0.37
SgceO70258 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
SgceO70258 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgceO70258 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.37■□□□□ 0.37
SgceO70258 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SgceO70258 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.37■□□□□ 0.37
SgceO70258 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SgceO70258 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgceO70258 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SgceO70258 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SgceO70258 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SgceO70258 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
SgceO70258 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgceO70258 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SgceO70258 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
SgceO70258 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgceO70258 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgceO70258 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgceO70258 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.36■□□□□ 0.37
SgceO70258 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgceO70258 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.36■□□□□ 0.37
SgceO70258 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SgceO70258 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SgceO70258 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgceO70258 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SgceO70258 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgceO70258 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgceO70258 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgceO70258 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SgceO70258 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgceO70258 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgceO70258 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
SgceO70258 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SgceO70258 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SgceO70258 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SgceO70258 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SgceO70258 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SgceO70258 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SgceO70258 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.33■□□□□ 0.36
SgceO70258 Gm13241-201ENSMUST00000094493 780 ntBASIC17.33■□□□□ 0.36
SgceO70258 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.33■□□□□ 0.36
SgceO70258 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SgceO70258 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgceO70258 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgceO70258 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgceO70258 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SgceO70258 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SgceO70258 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.33■□□□□ 0.36
SgceO70258 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.32■□□□□ 0.36
SgceO70258 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgceO70258 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgceO70258 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgceO70258 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SgceO70258 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgceO70258 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgceO70258 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgceO70258 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SgceO70258 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.32■□□□□ 0.36
SgceO70258 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
SgceO70258 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgceO70258 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgceO70258 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SgceO70258 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgceO70258 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgceO70258 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgceO70258 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms