Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh5O55240 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh5O55240 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh5O55240 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh5O55240 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh5O55240 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh5O55240 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh5O55240 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh5O55240 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh5O55240 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh5O55240 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.5■□□□□ 0.55
Rdh5O55240 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.5■□□□□ 0.55
Rdh5O55240 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.5■□□□□ 0.55
Rdh5O55240 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh5O55240 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rdh5O55240 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.5■□□□□ 0.55
Rdh5O55240 Golph3-202ENSMUST00000226517 2359 ntBASIC18.5■□□□□ 0.55
Rdh5O55240 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.5■□□□□ 0.55
Rdh5O55240 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh5O55240 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Rdh5O55240 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Rdh5O55240 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh5O55240 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh5O55240 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Rdh5O55240 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh5O55240 Gm43137-201ENSMUST00000198052 594 ntBASIC18.49■□□□□ 0.55
Rdh5O55240 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.49■□□□□ 0.55
Rdh5O55240 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh5O55240 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rdh5O55240 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rdh5O55240 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rdh5O55240 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rdh5O55240 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Rdh5O55240 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh5O55240 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh5O55240 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh5O55240 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Rdh5O55240 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh5O55240 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh5O55240 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh5O55240 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh5O55240 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh5O55240 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh5O55240 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh5O55240 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh5O55240 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh5O55240 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh5O55240 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.47■□□□□ 0.55
Rdh5O55240 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.47■□□□□ 0.55
Rdh5O55240 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh5O55240 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rdh5O55240 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rdh5O55240 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rdh5O55240 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rdh5O55240 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rdh5O55240 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rdh5O55240 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rdh5O55240 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rdh5O55240 AA386476-201ENSMUST00000098781 1665 ntBASIC18.46■□□□□ 0.55
Rdh5O55240 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Rdh5O55240 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rdh5O55240 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rdh5O55240 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.54
Rdh5O55240 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh5O55240 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rdh5O55240 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh5O55240 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh5O55240 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh5O55240 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.45■□□□□ 0.54
Rdh5O55240 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh5O55240 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh5O55240 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh5O55240 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rdh5O55240 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh5O55240 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Serp2-204ENSMUST00000228055 705 ntBASIC18.44■□□□□ 0.54
Rdh5O55240 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.44■□□□□ 0.54
Rdh5O55240 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh5O55240 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Rdh5O55240 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rdh5O55240 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.43■□□□□ 0.54
Rdh5O55240 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.43■□□□□ 0.54
Rdh5O55240 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rdh5O55240 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rdh5O55240 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rdh5O55240 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms