Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.38■□□□□ 0.85
Cldn5O54942 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn5O54942 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.38■□□□□ 0.85
Cldn5O54942 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.38■□□□□ 0.85
Cldn5O54942 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn5O54942 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn5O54942 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
Cldn5O54942 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.37■□□□□ 0.85
Cldn5O54942 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn5O54942 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn5O54942 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn5O54942 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn5O54942 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn5O54942 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn5O54942 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn5O54942 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn5O54942 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.36■□□□□ 0.85
Cldn5O54942 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn5O54942 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.36■□□□□ 0.85
Cldn5O54942 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.36■□□□□ 0.85
Cldn5O54942 Gm42642-201ENSMUST00000200683 355 ntBASIC20.36■□□□□ 0.85
Cldn5O54942 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn5O54942 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn5O54942 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn5O54942 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn5O54942 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn5O54942 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.35■□□□□ 0.85
Cldn5O54942 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn5O54942 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn5O54942 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn5O54942 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.34■□□□□ 0.85
Cldn5O54942 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cldn5O54942 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.34■□□□□ 0.85
Cldn5O54942 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn5O54942 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.34■□□□□ 0.85
Cldn5O54942 Gm27801-201ENSMUST00000184174 223 ntBASIC20.34■□□□□ 0.85
Cldn5O54942 Gm9988-201ENSMUST00000069786 435 ntBASIC20.34■□□□□ 0.85
Cldn5O54942 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Cldn5O54942 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn5O54942 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn5O54942 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn5O54942 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn5O54942 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn5O54942 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn5O54942 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cldn5O54942 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn5O54942 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cldn5O54942 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cldn5O54942 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.33■□□□□ 0.84
Cldn5O54942 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn5O54942 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn5O54942 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cldn5O54942 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
Cldn5O54942 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.32■□□□□ 0.84
Cldn5O54942 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Cldn5O54942 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn5O54942 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn5O54942 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn5O54942 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn5O54942 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn5O54942 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn5O54942 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.31■□□□□ 0.84
Cldn5O54942 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.31■□□□□ 0.84
Cldn5O54942 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn5O54942 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn5O54942 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn5O54942 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn5O54942 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Cldn5O54942 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn5O54942 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn5O54942 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn5O54942 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn5O54942 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn5O54942 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn5O54942 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn5O54942 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.3■□□□□ 0.84
Cldn5O54942 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.3■□□□□ 0.84
Cldn5O54942 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn5O54942 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn5O54942 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cldn5O54942 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn5O54942 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Cldn5O54942 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn5O54942 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.29■□□□□ 0.84
Cldn5O54942 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn5O54942 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn5O54942 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cldn5O54942 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn5O54942 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Cldn5O54942 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.29■□□□□ 0.84
Cldn5O54942 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cldn5O54942 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn5O54942 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.28■□□□□ 0.84
Cldn5O54942 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cldn5O54942 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn5O54942 Gm42569-201ENSMUST00000200539 472 ntBASIC20.28■□□□□ 0.84
Cldn5O54942 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn5O54942 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.28■□□□□ 0.84
Cldn5O54942 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn5O54942 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms