Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phox2bO35690 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Phox2bO35690 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.61■□□□□ 0.73
Phox2bO35690 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.61■□□□□ 0.73
Phox2bO35690 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Phox2bO35690 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Phox2bO35690 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.61■□□□□ 0.73
Phox2bO35690 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phox2bO35690 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Phox2bO35690 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Phox2bO35690 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Phox2bO35690 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.6■□□□□ 0.73
Phox2bO35690 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.6■□□□□ 0.73
Phox2bO35690 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Phox2bO35690 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Phox2bO35690 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Phox2bO35690 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Phox2bO35690 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.59■□□□□ 0.73
Phox2bO35690 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phox2bO35690 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phox2bO35690 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phox2bO35690 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Phox2bO35690 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Phox2bO35690 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phox2bO35690 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.59■□□□□ 0.73
Phox2bO35690 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.59■□□□□ 0.73
Phox2bO35690 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phox2bO35690 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phox2bO35690 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Phox2bO35690 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phox2bO35690 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Phox2bO35690 Gm37444-201ENSMUST00000193605 439 ntBASIC19.58■□□□□ 0.72
Phox2bO35690 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Phox2bO35690 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Phox2bO35690 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Phox2bO35690 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Phox2bO35690 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Phox2bO35690 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.57■□□□□ 0.72
Phox2bO35690 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Phox2bO35690 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.57■□□□□ 0.72
Phox2bO35690 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Phox2bO35690 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.57■□□□□ 0.72
Phox2bO35690 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Phox2bO35690 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Phox2bO35690 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Phox2bO35690 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Phox2bO35690 Gm10819-201ENSMUST00000099988 561 ntBASIC19.56■□□□□ 0.72
Phox2bO35690 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Phox2bO35690 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Phox2bO35690 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Phox2bO35690 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Phox2bO35690 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Phox2bO35690 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Phox2bO35690 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Phox2bO35690 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Phox2bO35690 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Phox2bO35690 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Phox2bO35690 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Phox2bO35690 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Phox2bO35690 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Phox2bO35690 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.54■□□□□ 0.72
Phox2bO35690 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.54■□□□□ 0.72
Phox2bO35690 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.54■□□□□ 0.72
Phox2bO35690 Gm6365-201ENSMUST00000054711 744 ntBASIC19.54■□□□□ 0.72
Phox2bO35690 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Phox2bO35690 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Phox2bO35690 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Phox2bO35690 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Phox2bO35690 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Phox2bO35690 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Phox2bO35690 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Phox2bO35690 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Phox2bO35690 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Phox2bO35690 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Phox2bO35690 Gm15565-201ENSMUST00000118890 427 ntBASIC19.53■□□□□ 0.72
Phox2bO35690 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Phox2bO35690 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Phox2bO35690 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Phox2bO35690 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Phox2bO35690 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Phox2bO35690 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
Phox2bO35690 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Phox2bO35690 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Phox2bO35690 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Phox2bO35690 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Phox2bO35690 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Phox2bO35690 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Phox2bO35690 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Phox2bO35690 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Phox2bO35690 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Phox2bO35690 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Phox2bO35690 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Phox2bO35690 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Phox2bO35690 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Phox2bO35690 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Phox2bO35690 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Phox2bO35690 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Phox2bO35690 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.51■□□□□ 0.71
Phox2bO35690 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Phox2bO35690 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms