Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scamp3O35609 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Scamp3O35609 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.43■□□□□ 0.7
Scamp3O35609 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scamp3O35609 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scamp3O35609 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scamp3O35609 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scamp3O35609 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scamp3O35609 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scamp3O35609 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scamp3O35609 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scamp3O35609 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scamp3O35609 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scamp3O35609 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scamp3O35609 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scamp3O35609 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scamp3O35609 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Scamp3O35609 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Scamp3O35609 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.42■□□□□ 0.7
Scamp3O35609 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scamp3O35609 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scamp3O35609 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.42■□□□□ 0.7
Scamp3O35609 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scamp3O35609 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scamp3O35609 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.41■□□□□ 0.7
Scamp3O35609 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scamp3O35609 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scamp3O35609 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scamp3O35609 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scamp3O35609 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scamp3O35609 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.41■□□□□ 0.7
Scamp3O35609 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scamp3O35609 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scamp3O35609 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scamp3O35609 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scamp3O35609 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scamp3O35609 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.4■□□□□ 0.7
Scamp3O35609 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scamp3O35609 Gm43060-201ENSMUST00000200621 289 ntBASIC19.4■□□□□ 0.7
Scamp3O35609 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scamp3O35609 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scamp3O35609 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Scamp3O35609 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scamp3O35609 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Scamp3O35609 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.39■□□□□ 0.7
Scamp3O35609 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Scamp3O35609 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scamp3O35609 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scamp3O35609 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scamp3O35609 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Scamp3O35609 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Scamp3O35609 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scamp3O35609 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scamp3O35609 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scamp3O35609 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scamp3O35609 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scamp3O35609 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scamp3O35609 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scamp3O35609 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scamp3O35609 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Scamp3O35609 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Scamp3O35609 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scamp3O35609 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Scamp3O35609 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scamp3O35609 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Scamp3O35609 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scamp3O35609 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.36■□□□□ 0.69
Scamp3O35609 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scamp3O35609 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Scamp3O35609 Gm11421-201ENSMUST00000122124 294 ntBASIC19.36■□□□□ 0.69
Scamp3O35609 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.36■□□□□ 0.69
Scamp3O35609 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scamp3O35609 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Scamp3O35609 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scamp3O35609 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scamp3O35609 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scamp3O35609 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scamp3O35609 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scamp3O35609 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scamp3O35609 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Scamp3O35609 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Scamp3O35609 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scamp3O35609 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scamp3O35609 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scamp3O35609 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.34■□□□□ 0.69
Scamp3O35609 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scamp3O35609 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scamp3O35609 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scamp3O35609 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scamp3O35609 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scamp3O35609 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scamp3O35609 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Scamp3O35609 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Scamp3O35609 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scamp3O35609 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Scamp3O35609 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scamp3O35609 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Scamp3O35609 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Scamp3O35609 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scamp3O35609 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms