Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc1a6O35544 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Slc1a6O35544 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.24■□□□□ 0.67
Slc1a6O35544 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Slc1a6O35544 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.23■□□□□ 0.67
Slc1a6O35544 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc1a6O35544 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc1a6O35544 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc1a6O35544 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc1a6O35544 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc1a6O35544 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Slc1a6O35544 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc1a6O35544 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Slc1a6O35544 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.23■□□□□ 0.67
Slc1a6O35544 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc1a6O35544 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc1a6O35544 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Slc1a6O35544 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Slc1a6O35544 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc1a6O35544 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc1a6O35544 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc1a6O35544 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc1a6O35544 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc1a6O35544 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc1a6O35544 Gm9870-201ENSMUST00000063874 645 ntBASIC19.22■□□□□ 0.67
Slc1a6O35544 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc1a6O35544 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Slc1a6O35544 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc1a6O35544 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc1a6O35544 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc1a6O35544 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc1a6O35544 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc1a6O35544 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.21■□□□□ 0.67
Slc1a6O35544 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.21■□□□□ 0.67
Slc1a6O35544 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc1a6O35544 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc1a6O35544 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.2■□□□□ 0.66
Slc1a6O35544 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Slc1a6O35544 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc1a6O35544 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc1a6O35544 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc1a6O35544 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc1a6O35544 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.2■□□□□ 0.66
Slc1a6O35544 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Slc1a6O35544 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc1a6O35544 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc1a6O35544 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc1a6O35544 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc1a6O35544 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc1a6O35544 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.19■□□□□ 0.66
Slc1a6O35544 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc1a6O35544 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc1a6O35544 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc1a6O35544 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.19■□□□□ 0.66
Slc1a6O35544 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc1a6O35544 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc1a6O35544 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Slc1a6O35544 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc1a6O35544 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc1a6O35544 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc1a6O35544 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc1a6O35544 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc1a6O35544 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc1a6O35544 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc1a6O35544 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc1a6O35544 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc1a6O35544 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc1a6O35544 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc1a6O35544 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Slc1a6O35544 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc1a6O35544 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc1a6O35544 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Slc1a6O35544 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.17■□□□□ 0.66
Slc1a6O35544 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc1a6O35544 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc1a6O35544 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Slc1a6O35544 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc1a6O35544 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Slc1a6O35544 AA386476-201ENSMUST00000098781 1665 ntBASIC19.17■□□□□ 0.66
Slc1a6O35544 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc1a6O35544 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Slc1a6O35544 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
Slc1a6O35544 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc1a6O35544 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Slc1a6O35544 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.16■□□□□ 0.66
Slc1a6O35544 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.16■□□□□ 0.66
Slc1a6O35544 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc1a6O35544 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.16■□□□□ 0.66
Slc1a6O35544 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc1a6O35544 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.16■□□□□ 0.66
Slc1a6O35544 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Slc1a6O35544 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc1a6O35544 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc1a6O35544 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc1a6O35544 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.16■□□□□ 0.66
Slc1a6O35544 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc1a6O35544 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc1a6O35544 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc1a6O35544 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc1a6O35544 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms