Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clk4O35493 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clk4O35493 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.66■□□□□ 0.58
Clk4O35493 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Clk4O35493 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk4O35493 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk4O35493 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk4O35493 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk4O35493 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Clk4O35493 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Clk4O35493 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clk4O35493 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk4O35493 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clk4O35493 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clk4O35493 Gm6139-201ENSMUST00000079261 882 ntBASIC18.65■□□□□ 0.58
Clk4O35493 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk4O35493 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Clk4O35493 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clk4O35493 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Clk4O35493 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Clk4O35493 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clk4O35493 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clk4O35493 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clk4O35493 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk4O35493 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Clk4O35493 Gm8493-201ENSMUST00000196881 489 ntBASIC18.64■□□□□ 0.57
Clk4O35493 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk4O35493 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk4O35493 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Clk4O35493 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk4O35493 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.64■□□□□ 0.57
Clk4O35493 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clk4O35493 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Clk4O35493 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk4O35493 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk4O35493 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Clk4O35493 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk4O35493 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk4O35493 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk4O35493 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clk4O35493 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk4O35493 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk4O35493 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.63■□□□□ 0.57
Clk4O35493 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Clk4O35493 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk4O35493 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk4O35493 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk4O35493 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk4O35493 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clk4O35493 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Clk4O35493 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk4O35493 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Clk4O35493 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk4O35493 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk4O35493 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk4O35493 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk4O35493 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk4O35493 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Clk4O35493 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.61■□□□□ 0.57
Clk4O35493 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk4O35493 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Clk4O35493 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk4O35493 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk4O35493 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk4O35493 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.6■□□□□ 0.57
Clk4O35493 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Clk4O35493 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.6■□□□□ 0.57
Clk4O35493 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.6■□□□□ 0.57
Clk4O35493 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk4O35493 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk4O35493 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clk4O35493 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk4O35493 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clk4O35493 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk4O35493 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk4O35493 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk4O35493 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
Clk4O35493 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Clk4O35493 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk4O35493 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.59■□□□□ 0.57
Clk4O35493 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk4O35493 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk4O35493 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.59■□□□□ 0.57
Clk4O35493 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.59■□□□□ 0.57
Clk4O35493 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clk4O35493 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.59■□□□□ 0.57
Clk4O35493 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.59■□□□□ 0.57
Clk4O35493 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk4O35493 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clk4O35493 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.59■□□□□ 0.57
Clk4O35493 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk4O35493 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clk4O35493 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk4O35493 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk4O35493 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk4O35493 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk4O35493 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clk4O35493 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clk4O35493 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clk4O35493 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms