Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ercc2O08811 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ercc2O08811 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ercc2O08811 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ercc2O08811 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ercc2O08811 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.06■□□□□ 0.8
Ercc2O08811 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ercc2O08811 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ercc2O08811 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ercc2O08811 Gm6139-201ENSMUST00000079261 882 ntBASIC20.06■□□□□ 0.8
Ercc2O08811 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ercc2O08811 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ercc2O08811 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.05■□□□□ 0.8
Ercc2O08811 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Ercc2O08811 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ercc2O08811 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ercc2O08811 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Ercc2O08811 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ercc2O08811 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ercc2O08811 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ercc2O08811 Notumos-201ENSMUST00000151998 2659 ntBASIC20.04■□□□□ 0.8
Ercc2O08811 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ercc2O08811 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ercc2O08811 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ercc2O08811 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ercc2O08811 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.04■□□□□ 0.8
Ercc2O08811 Gm43173-201ENSMUST00000202246 593 ntBASIC20.04■□□□□ 0.8
Ercc2O08811 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ercc2O08811 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ercc2O08811 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ercc2O08811 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ercc2O08811 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ercc2O08811 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ercc2O08811 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ercc2O08811 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.03■□□□□ 0.8
Ercc2O08811 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ercc2O08811 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.03■□□□□ 0.8
Ercc2O08811 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ercc2O08811 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ercc2O08811 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ercc2O08811 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ercc2O08811 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ercc2O08811 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ercc2O08811 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ercc2O08811 Serp2-204ENSMUST00000228055 705 ntBASIC20.02■□□□□ 0.8
Ercc2O08811 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ercc2O08811 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ercc2O08811 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ercc2O08811 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ercc2O08811 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ercc2O08811 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Ercc2O08811 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.02■□□□□ 0.79
Ercc2O08811 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ercc2O08811 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ercc2O08811 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.01■□□□□ 0.79
Ercc2O08811 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ercc2O08811 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ercc2O08811 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ercc2O08811 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ercc2O08811 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ercc2O08811 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ercc2O08811 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ercc2O08811 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.01■□□□□ 0.79
Ercc2O08811 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ercc2O08811 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ercc2O08811 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20■□□□□ 0.79
Ercc2O08811 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20■□□□□ 0.79
Ercc2O08811 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ercc2O08811 AC154266.1-201ENSMUST00000223190 503 ntBASIC20■□□□□ 0.79
Ercc2O08811 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ercc2O08811 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ercc2O08811 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ercc2O08811 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc2O08811 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc2O08811 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc2O08811 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc2O08811 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc2O08811 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc2O08811 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc2O08811 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.99■□□□□ 0.79
Ercc2O08811 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc2O08811 Smad6-203ENSMUST00000179458 273 ntBASIC19.98■□□□□ 0.79
Ercc2O08811 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc2O08811 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc2O08811 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc2O08811 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc2O08811 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc2O08811 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc2O08811 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.97■□□□□ 0.79
Ercc2O08811 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc2O08811 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ercc2O08811 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc2O08811 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc2O08811 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ercc2O08811 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Ercc2O08811 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Ercc2O08811 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc2O08811 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc2O08811 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Ercc2O08811 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms