Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf3O08791 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf3O08791 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf3O08791 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf3O08791 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Ebf3O08791 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf3O08791 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.26■□□□□ 0.83
Ebf3O08791 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf3O08791 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf3O08791 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf3O08791 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf3O08791 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf3O08791 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf3O08791 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf3O08791 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf3O08791 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf3O08791 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf3O08791 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf3O08791 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf3O08791 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ebf3O08791 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.25■□□□□ 0.83
Ebf3O08791 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf3O08791 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf3O08791 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf3O08791 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf3O08791 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ebf3O08791 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.24■□□□□ 0.83
Ebf3O08791 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ebf3O08791 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ebf3O08791 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ebf3O08791 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ebf3O08791 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ebf3O08791 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.23■□□□□ 0.83
Ebf3O08791 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ebf3O08791 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.23■□□□□ 0.83
Ebf3O08791 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.23■□□□□ 0.83
Ebf3O08791 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ebf3O08791 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ebf3O08791 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.23■□□□□ 0.83
Ebf3O08791 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ebf3O08791 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ebf3O08791 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.22■□□□□ 0.83
Ebf3O08791 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ebf3O08791 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ebf3O08791 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ebf3O08791 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.22■□□□□ 0.83
Ebf3O08791 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ebf3O08791 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf3O08791 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Ebf3O08791 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf3O08791 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf3O08791 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf3O08791 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf3O08791 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf3O08791 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf3O08791 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf3O08791 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf3O08791 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf3O08791 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf3O08791 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf3O08791 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf3O08791 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ebf3O08791 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ebf3O08791 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ebf3O08791 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ebf3O08791 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ebf3O08791 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ebf3O08791 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ebf3O08791 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ebf3O08791 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ebf3O08791 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ebf3O08791 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ebf3O08791 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ebf3O08791 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ebf3O08791 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
Ebf3O08791 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ebf3O08791 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ebf3O08791 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.19■□□□□ 0.82
Ebf3O08791 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ebf3O08791 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.19■□□□□ 0.82
Ebf3O08791 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.19■□□□□ 0.82
Ebf3O08791 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.19■□□□□ 0.82
Ebf3O08791 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.19■□□□□ 0.82
Ebf3O08791 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ebf3O08791 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
Ebf3O08791 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ebf3O08791 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ebf3O08791 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ebf3O08791 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ebf3O08791 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ebf3O08791 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Ebf3O08791 Gm27011-201ENSMUST00000182352 972 ntBASIC20.18■□□□□ 0.82
Ebf3O08791 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.18■□□□□ 0.82
Ebf3O08791 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.18■□□□□ 0.82
Ebf3O08791 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.18■□□□□ 0.82
Ebf3O08791 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ebf3O08791 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ebf3O08791 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ebf3O08791 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ebf3O08791 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms