Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1cO08604 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1cO08604 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1cO08604 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1cO08604 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1cO08604 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1cO08604 Gm21956-201ENSMUST00000179946 522 ntBASIC17.42■□□□□ 0.38
Raet1cO08604 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.42■□□□□ 0.38
Raet1cO08604 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1cO08604 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1cO08604 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1cO08604 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1cO08604 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1cO08604 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.42■□□□□ 0.38
Raet1cO08604 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1cO08604 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1cO08604 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1cO08604 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1cO08604 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1cO08604 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Raet1cO08604 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1cO08604 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1cO08604 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1cO08604 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.41■□□□□ 0.38
Raet1cO08604 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1cO08604 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1cO08604 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1cO08604 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1cO08604 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1cO08604 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1cO08604 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Raet1cO08604 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1cO08604 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1cO08604 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1cO08604 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.4■□□□□ 0.38
Raet1cO08604 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1cO08604 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.39■□□□□ 0.38
Raet1cO08604 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Raet1cO08604 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Raet1cO08604 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1cO08604 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1cO08604 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.39■□□□□ 0.37
Raet1cO08604 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Raet1cO08604 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.39■□□□□ 0.37
Raet1cO08604 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Raet1cO08604 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Raet1cO08604 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Raet1cO08604 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1cO08604 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1cO08604 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.38■□□□□ 0.37
Raet1cO08604 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1cO08604 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.38■□□□□ 0.37
Raet1cO08604 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Raet1cO08604 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.38■□□□□ 0.37
Raet1cO08604 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1cO08604 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1cO08604 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Raet1cO08604 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1cO08604 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1cO08604 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1cO08604 Gm43137-201ENSMUST00000198052 594 ntBASIC17.37■□□□□ 0.37
Raet1cO08604 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.37■□□□□ 0.37
Raet1cO08604 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1cO08604 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1cO08604 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1cO08604 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Raet1cO08604 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1cO08604 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1cO08604 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.37■□□□□ 0.37
Raet1cO08604 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1cO08604 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1cO08604 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Raet1cO08604 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1cO08604 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1cO08604 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1cO08604 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1cO08604 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1cO08604 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1cO08604 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Raet1cO08604 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1cO08604 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.36■□□□□ 0.37
Raet1cO08604 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.36■□□□□ 0.37
Raet1cO08604 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1cO08604 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1cO08604 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1cO08604 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1cO08604 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1cO08604 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Raet1cO08604 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Raet1cO08604 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Raet1cO08604 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.35■□□□□ 0.37
Raet1cO08604 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.35■□□□□ 0.37
Raet1cO08604 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1cO08604 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Raet1cO08604 AA386476-201ENSMUST00000098781 1665 ntBASIC17.35■□□□□ 0.37
Raet1cO08604 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1cO08604 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1cO08604 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.35■□□□□ 0.37
Raet1cO08604 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1cO08604 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms