Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.09■■□□□ 1.13
B020004C17RikJ3QP07 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
B020004C17RikJ3QP07 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
B020004C17RikJ3QP07 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
B020004C17RikJ3QP07 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
B020004C17RikJ3QP07 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
B020004C17RikJ3QP07 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
B020004C17RikJ3QP07 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
B020004C17RikJ3QP07 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
B020004C17RikJ3QP07 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
B020004C17RikJ3QP07 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
B020004C17RikJ3QP07 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
B020004C17RikJ3QP07 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
B020004C17RikJ3QP07 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
B020004C17RikJ3QP07 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
B020004C17RikJ3QP07 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
B020004C17RikJ3QP07 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
B020004C17RikJ3QP07 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
B020004C17RikJ3QP07 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
B020004C17RikJ3QP07 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.07■■□□□ 1.12
B020004C17RikJ3QP07 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC22.07■■□□□ 1.12
B020004C17RikJ3QP07 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
B020004C17RikJ3QP07 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
B020004C17RikJ3QP07 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
B020004C17RikJ3QP07 Gm10252-201ENSMUST00000209541 832 ntBASIC22.07■■□□□ 1.12
B020004C17RikJ3QP07 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
B020004C17RikJ3QP07 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
B020004C17RikJ3QP07 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.07■■□□□ 1.12
B020004C17RikJ3QP07 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
B020004C17RikJ3QP07 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
B020004C17RikJ3QP07 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
B020004C17RikJ3QP07 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
B020004C17RikJ3QP07 Gm13168-201ENSMUST00000121771 632 ntBASIC22.06■■□□□ 1.12
B020004C17RikJ3QP07 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC22.06■■□□□ 1.12
B020004C17RikJ3QP07 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
B020004C17RikJ3QP07 AC122769.4-201ENSMUST00000228166 901 ntBASIC22.06■■□□□ 1.12
B020004C17RikJ3QP07 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
B020004C17RikJ3QP07 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
B020004C17RikJ3QP07 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
B020004C17RikJ3QP07 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.06■■□□□ 1.12
B020004C17RikJ3QP07 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.05■■□□□ 1.12
B020004C17RikJ3QP07 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
B020004C17RikJ3QP07 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
B020004C17RikJ3QP07 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
B020004C17RikJ3QP07 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.05■■□□□ 1.12
B020004C17RikJ3QP07 AC135637.1-201ENSMUST00000227750 365 ntBASIC22.05■■□□□ 1.12
B020004C17RikJ3QP07 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
B020004C17RikJ3QP07 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
B020004C17RikJ3QP07 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.05■■□□□ 1.12
B020004C17RikJ3QP07 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
B020004C17RikJ3QP07 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
B020004C17RikJ3QP07 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC22.04■■□□□ 1.12
B020004C17RikJ3QP07 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.04■■□□□ 1.12
B020004C17RikJ3QP07 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.04■■□□□ 1.12
B020004C17RikJ3QP07 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
B020004C17RikJ3QP07 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
B020004C17RikJ3QP07 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
B020004C17RikJ3QP07 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
B020004C17RikJ3QP07 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
B020004C17RikJ3QP07 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
B020004C17RikJ3QP07 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC22.03■■□□□ 1.12
B020004C17RikJ3QP07 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
B020004C17RikJ3QP07 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
B020004C17RikJ3QP07 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
B020004C17RikJ3QP07 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
B020004C17RikJ3QP07 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
B020004C17RikJ3QP07 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
B020004C17RikJ3QP07 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
B020004C17RikJ3QP07 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
B020004C17RikJ3QP07 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.02■■□□□ 1.12
B020004C17RikJ3QP07 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.02■■□□□ 1.12
B020004C17RikJ3QP07 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
B020004C17RikJ3QP07 Gm37856-201ENSMUST00000191634 999 ntBASIC22.02■■□□□ 1.12
B020004C17RikJ3QP07 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
B020004C17RikJ3QP07 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
B020004C17RikJ3QP07 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.02■■□□□ 1.12
B020004C17RikJ3QP07 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
B020004C17RikJ3QP07 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
B020004C17RikJ3QP07 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
B020004C17RikJ3QP07 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
B020004C17RikJ3QP07 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC22.01■■□□□ 1.11
B020004C17RikJ3QP07 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
B020004C17RikJ3QP07 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
B020004C17RikJ3QP07 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.01■■□□□ 1.11
B020004C17RikJ3QP07 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
B020004C17RikJ3QP07 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
B020004C17RikJ3QP07 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
B020004C17RikJ3QP07 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
B020004C17RikJ3QP07 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22■■□□□ 1.11
B020004C17RikJ3QP07 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
B020004C17RikJ3QP07 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
B020004C17RikJ3QP07 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22■■□□□ 1.11
B020004C17RikJ3QP07 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22■■□□□ 1.11
B020004C17RikJ3QP07 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22■■□□□ 1.11
B020004C17RikJ3QP07 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22■■□□□ 1.11
B020004C17RikJ3QP07 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
B020004C17RikJ3QP07 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22■■□□□ 1.11
B020004C17RikJ3QP07 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.99■■□□□ 1.11
B020004C17RikJ3QP07 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
B020004C17RikJ3QP07 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms