Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf6F6VAN0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Atf6F6VAN0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf6F6VAN0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf6F6VAN0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Atf6F6VAN0 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.06■□□□□ 0.8
Atf6F6VAN0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf6F6VAN0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.06■□□□□ 0.8
Atf6F6VAN0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.06■□□□□ 0.8
Atf6F6VAN0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atf6F6VAN0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf6F6VAN0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atf6F6VAN0 Gm13241-201ENSMUST00000094493 780 ntBASIC20.06■□□□□ 0.8
Atf6F6VAN0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf6F6VAN0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf6F6VAN0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf6F6VAN0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf6F6VAN0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atf6F6VAN0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf6F6VAN0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf6F6VAN0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf6F6VAN0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf6F6VAN0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Atf6F6VAN0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf6F6VAN0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Atf6F6VAN0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.05■□□□□ 0.8
Atf6F6VAN0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Atf6F6VAN0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.04■□□□□ 0.8
Atf6F6VAN0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atf6F6VAN0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atf6F6VAN0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Atf6F6VAN0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atf6F6VAN0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atf6F6VAN0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atf6F6VAN0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atf6F6VAN0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Atf6F6VAN0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atf6F6VAN0 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.03■□□□□ 0.8
Atf6F6VAN0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Atf6F6VAN0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.03■□□□□ 0.8
Atf6F6VAN0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Atf6F6VAN0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atf6F6VAN0 AA386476-201ENSMUST00000098781 1665 ntBASIC20.03■□□□□ 0.8
Atf6F6VAN0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atf6F6VAN0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atf6F6VAN0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Atf6F6VAN0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf6F6VAN0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Atf6F6VAN0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf6F6VAN0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.02■□□□□ 0.8
Atf6F6VAN0 Gm43137-201ENSMUST00000198052 594 ntBASIC20.02■□□□□ 0.8
Atf6F6VAN0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf6F6VAN0 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.02■□□□□ 0.8
Atf6F6VAN0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf6F6VAN0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf6F6VAN0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atf6F6VAN0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Atf6F6VAN0 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.02■□□□□ 0.79
Atf6F6VAN0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atf6F6VAN0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atf6F6VAN0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atf6F6VAN0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atf6F6VAN0 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.01■□□□□ 0.79
Atf6F6VAN0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atf6F6VAN0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atf6F6VAN0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atf6F6VAN0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atf6F6VAN0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atf6F6VAN0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Atf6F6VAN0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20■□□□□ 0.79
Atf6F6VAN0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20■□□□□ 0.79
Atf6F6VAN0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Atf6F6VAN0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20■□□□□ 0.79
Atf6F6VAN0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20■□□□□ 0.79
Atf6F6VAN0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atf6F6VAN0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atf6F6VAN0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atf6F6VAN0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Atf6F6VAN0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atf6F6VAN0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.99■□□□□ 0.79
Atf6F6VAN0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf6F6VAN0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf6F6VAN0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
Atf6F6VAN0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.99■□□□□ 0.79
Atf6F6VAN0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf6F6VAN0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf6F6VAN0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf6F6VAN0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf6F6VAN0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Atf6F6VAN0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf6F6VAN0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf6F6VAN0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf6F6VAN0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf6F6VAN0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf6F6VAN0 Iqck-206ENSMUST00000208658 2891 ntBASIC19.97■□□□□ 0.79
Atf6F6VAN0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf6F6VAN0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf6F6VAN0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.97■□□□□ 0.79
Atf6F6VAN0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf6F6VAN0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms