Protein–RNA interactions for Protein: E9Q9P8

Rdh16f1, RDH16 family member 1, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh16f1E9Q9P8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rdh16f1E9Q9P8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rdh16f1E9Q9P8 Gm12251-201ENSMUST00000117893 792 ntBASIC17.34■□□□□ 0.37
Rdh16f1E9Q9P8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rdh16f1E9Q9P8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rdh16f1E9Q9P8 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.34■□□□□ 0.37
Rdh16f1E9Q9P8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rdh16f1E9Q9P8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rdh16f1E9Q9P8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rdh16f1E9Q9P8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Rdh16f1E9Q9P8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Rdh16f1E9Q9P8 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.33■□□□□ 0.37
Rdh16f1E9Q9P8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rdh16f1E9Q9P8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rdh16f1E9Q9P8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rdh16f1E9Q9P8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.33■□□□□ 0.37
Rdh16f1E9Q9P8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rdh16f1E9Q9P8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rdh16f1E9Q9P8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rdh16f1E9Q9P8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Rdh16f1E9Q9P8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Rdh16f1E9Q9P8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rdh16f1E9Q9P8 Spcs1-204ENSMUST00000226782 949 ntBASIC17.33■□□□□ 0.36
Rdh16f1E9Q9P8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rdh16f1E9Q9P8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rdh16f1E9Q9P8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rdh16f1E9Q9P8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rdh16f1E9Q9P8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh16f1E9Q9P8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh16f1E9Q9P8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh16f1E9Q9P8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh16f1E9Q9P8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rdh16f1E9Q9P8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.32■□□□□ 0.36
Rdh16f1E9Q9P8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh16f1E9Q9P8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh16f1E9Q9P8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.32■□□□□ 0.36
Rdh16f1E9Q9P8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh16f1E9Q9P8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.32■□□□□ 0.36
Rdh16f1E9Q9P8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rdh16f1E9Q9P8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh16f1E9Q9P8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh16f1E9Q9P8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh16f1E9Q9P8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh16f1E9Q9P8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh16f1E9Q9P8 Gm8493-201ENSMUST00000196881 489 ntBASIC17.28■□□□□ 0.36
Rdh16f1E9Q9P8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh16f1E9Q9P8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.28■□□□□ 0.36
Rdh16f1E9Q9P8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh16f1E9Q9P8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh16f1E9Q9P8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh16f1E9Q9P8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rdh16f1E9Q9P8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.27■□□□□ 0.36
Rdh16f1E9Q9P8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh16f1E9Q9P8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms