Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb9E9Q5G2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhb9E9Q5G2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhb9E9Q5G2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.14■■□□□ 1.3
Pcdhb9E9Q5G2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhb9E9Q5G2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb9E9Q5G2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
Pcdhb9E9Q5G2 Gm27801-201ENSMUST00000184174 223 ntBASIC23.14■■□□□ 1.29
Pcdhb9E9Q5G2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Pcdhb9E9Q5G2 Gm10493-201ENSMUST00000097270 612 ntBASIC23.14■■□□□ 1.29
Pcdhb9E9Q5G2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb9E9Q5G2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb9E9Q5G2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.13■■□□□ 1.29
Pcdhb9E9Q5G2 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.13■■□□□ 1.29
Pcdhb9E9Q5G2 Gm8495-201ENSMUST00000188740 694 ntBASIC23.13■■□□□ 1.29
Pcdhb9E9Q5G2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb9E9Q5G2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.13■■□□□ 1.29
Pcdhb9E9Q5G2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb9E9Q5G2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb9E9Q5G2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb9E9Q5G2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC23.13■■□□□ 1.29
Pcdhb9E9Q5G2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb9E9Q5G2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb9E9Q5G2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb9E9Q5G2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb9E9Q5G2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
Pcdhb9E9Q5G2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.12■■□□□ 1.29
Pcdhb9E9Q5G2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC23.12■■□□□ 1.29
Pcdhb9E9Q5G2 Gm20100-201ENSMUST00000209418 2272 ntBASIC23.12■■□□□ 1.29
Pcdhb9E9Q5G2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Pcdhb9E9Q5G2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.11■■□□□ 1.29
Pcdhb9E9Q5G2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb9E9Q5G2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb9E9Q5G2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb9E9Q5G2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb9E9Q5G2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.1■■□□□ 1.29
Pcdhb9E9Q5G2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.1■■□□□ 1.29
Pcdhb9E9Q5G2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.1■■□□□ 1.29
Pcdhb9E9Q5G2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Gm5874-201ENSMUST00000096101 508 ntBASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb9E9Q5G2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.29
Pcdhb9E9Q5G2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb9E9Q5G2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb9E9Q5G2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.08■■□□□ 1.29
Pcdhb9E9Q5G2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.08■■□□□ 1.29
Pcdhb9E9Q5G2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb9E9Q5G2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb9E9Q5G2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Pcdhb9E9Q5G2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb9E9Q5G2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhb9E9Q5G2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhb9E9Q5G2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhb9E9Q5G2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhb9E9Q5G2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Pcdhb9E9Q5G2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Pcdhb9E9Q5G2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Pcdhb9E9Q5G2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb9E9Q5G2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb9E9Q5G2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Pcdhb9E9Q5G2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb9E9Q5G2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb9E9Q5G2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb9E9Q5G2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
Pcdhb9E9Q5G2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb9E9Q5G2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb9E9Q5G2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb9E9Q5G2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb9E9Q5G2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb9E9Q5G2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb9E9Q5G2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Pcdhb9E9Q5G2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb9E9Q5G2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb9E9Q5G2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb9E9Q5G2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.03■■□□□ 1.28
Pcdhb9E9Q5G2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Pcdhb9E9Q5G2 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.03■■□□□ 1.28
Pcdhb9E9Q5G2 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.03■■□□□ 1.28
Pcdhb9E9Q5G2 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.03■■□□□ 1.28
Pcdhb9E9Q5G2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC23.03■■□□□ 1.28
Pcdhb9E9Q5G2 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.03■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms